Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D01
(587 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q94518 Cluster: Nascent polypeptide-associated complex ... 161 8e-39
UniRef50_UPI0000F2E961 Cluster: PREDICTED: similar to alpha-NAC,... 135 6e-31
UniRef50_Q13765 Cluster: Nascent polypeptide-associated complex ... 135 6e-31
UniRef50_Q5SWP3 Cluster: NAC-alpha domain-containing protein 1; ... 133 3e-30
UniRef50_UPI0000E7FCB7 Cluster: PREDICTED: similar to mKIAA0363 ... 131 1e-29
UniRef50_UPI0000E2148E Cluster: PREDICTED: similar to KIAA0363; ... 130 2e-29
UniRef50_O15069 Cluster: NAC-alpha domain-containing protein 1; ... 130 2e-29
UniRef50_Q5DBN5 Cluster: SJCHGC09320 protein; n=1; Schistosoma j... 127 2e-28
UniRef50_Q9LHG9 Cluster: Nascent polypeptide-associated complex ... 120 3e-26
UniRef50_Q8LGC6 Cluster: Nascent polypeptide-associated complex ... 113 4e-24
UniRef50_Q94JX9 Cluster: Nascent polypeptide-associated complex ... 112 5e-24
UniRef50_A6SB28 Cluster: Nascent polypeptide-associated complex ... 106 4e-22
UniRef50_A7APM3 Cluster: NAC domain containing protein; n=1; Bab... 105 8e-22
UniRef50_P0C2C7 Cluster: Nascent polypeptide-associated complex ... 103 2e-21
UniRef50_Q45FF9 Cluster: Nascent polypeptide-associated complex ... 102 5e-21
UniRef50_Q4N187 Cluster: Nascent polypeptide associated complex ... 100 5e-20
UniRef50_Q5K8B4 Cluster: Nascent polypeptide-associated complex ... 89 7e-17
UniRef50_Q9VPV7 Cluster: CG4415-PA; n=3; Sophophora|Rep: CG4415-... 88 1e-16
UniRef50_Q4P341 Cluster: Nascent polypeptide-associated complex ... 88 2e-16
UniRef50_A0BPX1 Cluster: Chromosome undetermined scaffold_12, wh... 79 8e-14
UniRef50_A2ZWW9 Cluster: Putative uncharacterized protein; n=1; ... 73 4e-12
UniRef50_Q6CDH0 Cluster: Nascent polypeptide-associated complex ... 72 9e-12
UniRef50_A7KN23 Cluster: Nascent polypeptide-associated complex ... 71 2e-11
UniRef50_Q7RBD2 Cluster: NAC domain, putative; n=7; Plasmodium|R... 70 4e-11
UniRef50_P38879 Cluster: Nascent polypeptide-associated complex ... 69 6e-11
UniRef50_Q756T5 Cluster: Nascent polypeptide-associated complex ... 69 6e-11
UniRef50_P87147 Cluster: Nascent polypeptide-associated complex ... 67 2e-10
UniRef50_Q54U07 Cluster: Putative nascent polypeptide-associated... 67 3e-10
UniRef50_Q5CRB7 Cluster: Nascent polypeptide associated complex ... 66 6e-10
UniRef50_O97212 Cluster: Possible nascent polypeptide associated... 66 8e-10
UniRef50_UPI0000499C9B Cluster: alpha-NAC protein; n=2; Entamoeb... 56 6e-07
UniRef50_A2DAU3 Cluster: NAC domain containing protein; n=3; Tri... 47 4e-04
UniRef50_Q98RX3 Cluster: Putative uncharacterized protein orf68;... 45 0.001
UniRef50_UPI00005A170F Cluster: PREDICTED: similar to nascent po... 40 0.043
UniRef50_UPI0000D9A813 Cluster: PREDICTED: similar to nascent po... 40 0.057
UniRef50_A3QTT0 Cluster: ORF121; n=3; Koi herpesvirus|Rep: ORF12... 36 0.53
UniRef50_Q23PS1 Cluster: Response regulator receiver domain cont... 36 0.70
UniRef50_Q7QS46 Cluster: GLP_74_26418_26011; n=1; Giardia lambli... 35 1.2
UniRef50_Q4UDF4 Cluster: Transcription factor btf3 homolog, puta... 35 1.2
UniRef50_A0CH86 Cluster: Chromosome undetermined scaffold_18, wh... 34 2.1
UniRef50_Q96K17 Cluster: Transcription factor BTF3 homolog 4; n=... 33 3.7
UniRef50_Q01C74 Cluster: Chromosome 03 contig 1, DNA sequence; n... 33 4.9
UniRef50_UPI0001552931 Cluster: PREDICTED: similar to ADIR1; n=1... 33 6.5
UniRef50_Q7MQQ4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_A7P866 Cluster: Chromosome chr3 scaffold_8, whole genom... 33 6.5
UniRef50_Q03696 Cluster: Neuronal-glial cell adhesion molecule p... 33 6.5
>UniRef50_Q94518 Cluster: Nascent polypeptide-associated complex
subunit alpha; n=32; Eukaryota|Rep: Nascent
polypeptide-associated complex subunit alpha -
Drosophila melanogaster (Fruit fly)
Length = 217
Score = 161 bits (392), Expect = 8e-39
Identities = 93/140 (66%), Positives = 101/140 (72%), Gaps = 4/140 (2%)
Frame = +2
Query: 179 IPELEDAGAP----GAGGISNPIAGIDIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVT 346
+P LE+A A G G PI D+VSKAKQSRGEKKARKIM KLGLK +QGVNRVT
Sbjct: 39 MPGLEEAVAATTQLGGGATGLPI---DLVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVT 95
Query: 347 IRKSKNILFVINNPDVFKNPHSDTYIVFGEAKIEDLSQQATMAAAERFKXXXXXXXXXXX 526
IRKSKNILFVINNPDV+KNPHSDTYIVFGEAKIEDLSQQA +AAAE+FK
Sbjct: 96 IRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQQAQVAAAEKFK-APEAAGAADS 154
Query: 527 XXXXXXXXPIAEEEHEEGVD 586
PIAEE+ EE VD
Sbjct: 155 VGATTSVAPIAEED-EEDVD 173
>UniRef50_UPI0000F2E961 Cluster: PREDICTED: similar to alpha-NAC,
muscle-specific form gp220; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to alpha-NAC,
muscle-specific form gp220 - Monodelphis domestica
Length = 1027
Score = 135 bits (327), Expect = 6e-31
Identities = 73/111 (65%), Positives = 84/111 (75%), Gaps = 5/111 (4%)
Frame = +2
Query: 176 TIPELEDAGAPGAGGISNPIAGI-----DIVSKAKQSRGEKKARKIMSKLGLKLVQGVNR 340
++PELE+ + A +A + VSKAKQSR EKKARK MSKLGL+ V GV R
Sbjct: 846 SVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTR 905
Query: 341 VTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKIEDLSQQATMAAAERFK 493
VTIRKSKNILFVI PDV+K+P SDTYIVFGEAKIEDLSQQA +AAAE+FK
Sbjct: 906 VTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 956
>UniRef50_Q13765 Cluster: Nascent polypeptide-associated complex
subunit alpha; n=41; Eukaryota|Rep: Nascent
polypeptide-associated complex subunit alpha - Homo
sapiens (Human)
Length = 215
Score = 135 bits (327), Expect = 6e-31
Identities = 73/111 (65%), Positives = 84/111 (75%), Gaps = 5/111 (4%)
Frame = +2
Query: 176 TIPELEDAGAPGAGGISNPIAGI-----DIVSKAKQSRGEKKARKIMSKLGLKLVQGVNR 340
++PELE+ + A +A + VSKAKQSR EKKARK MSKLGL+ V GV R
Sbjct: 34 SVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTR 93
Query: 341 VTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKIEDLSQQATMAAAERFK 493
VTIRKSKNILFVI PDV+K+P SDTYIVFGEAKIEDLSQQA +AAAE+FK
Sbjct: 94 VTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 144
>UniRef50_Q5SWP3 Cluster: NAC-alpha domain-containing protein 1; n=3;
Murinae|Rep: NAC-alpha domain-containing protein 1 - Mus
musculus (Mouse)
Length = 1504
Score = 133 bits (321), Expect = 3e-30
Identities = 67/111 (60%), Positives = 78/111 (70%)
Frame = +2
Query: 245 DIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYI 424
+ ++KAKQSR EKKARK MSKLGL+ +QGV R+TI+KSKNILFVI PDVFK+P SDTY+
Sbjct: 1346 ETIAKAKQSRSEKKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYV 1405
Query: 425 VFGEAKIEDLSQQATMAAAERFKXXXXXXXXXXXXXXXXXXXPIAEEEHEE 577
VFGEAKIEDLSQQ AAAE+FK P EE+ EE
Sbjct: 1406 VFGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPELSPGPRVRPECEEQEEE 1456
>UniRef50_UPI0000E7FCB7 Cluster: PREDICTED: similar to mKIAA0363
protein; n=3; Gallus gallus|Rep: PREDICTED: similar to
mKIAA0363 protein - Gallus gallus
Length = 1396
Score = 131 bits (316), Expect = 1e-29
Identities = 73/113 (64%), Positives = 83/113 (73%), Gaps = 7/113 (6%)
Frame = +2
Query: 176 TIPELEDA-GA-PGAGGISNPIA-----GIDIVSKAKQSRGEKKARKIMSKLGLKLVQGV 334
+IPELE+ GA P P+ G + +SKAKQSR EKKARK MSKLGL+ + GV
Sbjct: 1212 SIPELEEPEGAEPRPMQTQAPLTHSLGTGEESISKAKQSRSEKKARKAMSKLGLRQIHGV 1271
Query: 335 NRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKIEDLSQQATMAAAERFK 493
R+TIRKSKNILFVI PDVFK+P SD YIVFGEAKIEDLSQQ AAAE+FK
Sbjct: 1272 TRITIRKSKNILFVITKPDVFKSPASDIYIVFGEAKIEDLSQQVHKAAAEKFK 1324
>UniRef50_UPI0000E2148E Cluster: PREDICTED: similar to KIAA0363; n=1;
Pan troglodytes|Rep: PREDICTED: similar to KIAA0363 - Pan
troglodytes
Length = 1226
Score = 130 bits (314), Expect = 2e-29
Identities = 62/83 (74%), Positives = 72/83 (86%)
Frame = +2
Query: 245 DIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYI 424
+ ++KAKQSR EKKARK MSKLGL+ +QGV R+TI+KSKNILFVI PDVFK+P SDTY+
Sbjct: 1068 ETIAKAKQSRSEKKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYV 1127
Query: 425 VFGEAKIEDLSQQATMAAAERFK 493
VFGEAKIEDLSQQ AAAE+FK
Sbjct: 1128 VFGEAKIEDLSQQVHKAAAEKFK 1150
>UniRef50_O15069 Cluster: NAC-alpha domain-containing protein 1; n=4;
Homo sapiens|Rep: NAC-alpha domain-containing protein 1 -
Homo sapiens (Human)
Length = 1562
Score = 130 bits (314), Expect = 2e-29
Identities = 62/83 (74%), Positives = 72/83 (86%)
Frame = +2
Query: 245 DIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYI 424
+ ++KAKQSR EKKARK MSKLGL+ +QGV R+TI+KSKNILFVI PDVFK+P SDTY+
Sbjct: 1403 ETIAKAKQSRSEKKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYV 1462
Query: 425 VFGEAKIEDLSQQATMAAAERFK 493
VFGEAKIEDLSQQ AAAE+FK
Sbjct: 1463 VFGEAKIEDLSQQVHKAAAEKFK 1485
>UniRef50_Q5DBN5 Cluster: SJCHGC09320 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09320 protein - Schistosoma
japonicum (Blood fluke)
Length = 226
Score = 127 bits (307), Expect = 2e-28
Identities = 65/104 (62%), Positives = 85/104 (81%)
Frame = +2
Query: 182 PELEDAGAPGAGGISNPIAGIDIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSK 361
PELE++ G +S+ IA +++S+ KQSRGEKKARK MSKLGLKLVQGV RVTIRK+K
Sbjct: 29 PELENSKEQGDAKVSH-IAD-ELLSRCKQSRGEKKARKAMSKLGLKLVQGVCRVTIRKAK 86
Query: 362 NILFVINNPDVFKNPHSDTYIVFGEAKIEDLSQQATMAAAERFK 493
+I+FVIN +V+K+ SDTYI+FGEAK+ED+S QA +AAAE+ +
Sbjct: 87 SIMFVINRAEVYKSSASDTYIIFGEAKVEDISAQAQIAAAEKLR 130
>UniRef50_Q9LHG9 Cluster: Nascent polypeptide-associated complex
subunit alpha-like protein 1; n=2; Eukaryota|Rep:
Nascent polypeptide-associated complex subunit
alpha-like protein 1 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 203
Score = 120 bits (288), Expect = 3e-26
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = +2
Query: 257 KAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGE 436
K+KQSR EKK+RK M KLG+K + GV+RVT++KSKNILFVI+ PDVFK+P SDTY++FGE
Sbjct: 56 KSKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGE 115
Query: 437 AKIEDLSQQATMAAAERFKXXXXXXXXXXXXXXXXXXXPIAEEEHEEGVD 586
AKIEDLS Q AAE+FK EE EEGV+
Sbjct: 116 AKIEDLSSQIQSQAAEQFKAPDLSNVISKGESSSAAVVQDDEEVDEEGVE 165
>UniRef50_Q8LGC6 Cluster: Nascent polypeptide-associated complex
subunit alpha-like protein 5; n=6; Magnoliophyta|Rep:
Nascent polypeptide-associated complex subunit
alpha-like protein 5 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 209
Score = 113 bits (271), Expect = 4e-24
Identities = 55/109 (50%), Positives = 76/109 (69%)
Frame = +2
Query: 260 AKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEA 439
AKQSR EKK+RK + KLG+K V V+RVTI+++KN+LFVI+ PDV+K+P+++TY++FGEA
Sbjct: 59 AKQSRSEKKSRKAVLKLGMKPVSDVSRVTIKRAKNVLFVISKPDVYKSPNAETYVIFGEA 118
Query: 440 KIEDLSQQATMAAAERFKXXXXXXXXXXXXXXXXXXXPIAEEEHEEGVD 586
K++DLS Q AA+RFK P+AEEE E+ VD
Sbjct: 119 KVDDLSSQLQTQAAQRFK-MPDVTSMLPNAGSEATMAPLAEEEDEDDVD 166
>UniRef50_Q94JX9 Cluster: Nascent polypeptide-associated complex
subunit alpha-like protein 2; n=15; Magnoliophyta|Rep:
Nascent polypeptide-associated complex subunit
alpha-like protein 2 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 217
Score = 112 bits (270), Expect = 5e-24
Identities = 50/82 (60%), Positives = 67/82 (81%)
Frame = +2
Query: 248 IVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIV 427
+ +KQSR EKK+RK M KLG+K V GV+RVTI+++KN+LF I+ PDVFK+PHS+TY++
Sbjct: 63 VSGSSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNVLFFISKPDVFKSPHSETYVI 122
Query: 428 FGEAKIEDLSQQATMAAAERFK 493
FGEAKIEDLS Q AA++F+
Sbjct: 123 FGEAKIEDLSSQLQTQAAQQFR 144
>UniRef50_A6SB28 Cluster: Nascent polypeptide-associated complex
alpha polypeptide; n=2; Sclerotiniaceae|Rep: Nascent
polypeptide-associated complex alpha polypeptide -
Botryotinia fuckeliana B05.10
Length = 212
Score = 106 bits (254), Expect = 4e-22
Identities = 52/83 (62%), Positives = 65/83 (78%)
Frame = +2
Query: 233 IAGIDIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHS 412
+AGI S+ SR EKKARK ++KLGL V G+ RVT+R+ KNILFVIN P+V+K+P S
Sbjct: 39 VAGIPAGSQVAFSRNEKKARKSIAKLGLTRVPGITRVTLRRPKNILFVINQPEVYKSPTS 98
Query: 413 DTYIVFGEAKIEDLSQQATMAAA 481
+TYIVFGEAKIEDL+ QA +AA
Sbjct: 99 NTYIVFGEAKIEDLNSQAQASAA 121
>UniRef50_A7APM3 Cluster: NAC domain containing protein; n=1;
Babesia bovis|Rep: NAC domain containing protein -
Babesia bovis
Length = 207
Score = 105 bits (252), Expect = 8e-22
Identities = 43/78 (55%), Positives = 64/78 (82%)
Frame = +2
Query: 254 SKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFG 433
SK +Q++ E+K+RK++ KLGLK V+G+ +V I+KSK + FV+N PDV+K P+SDTYI+FG
Sbjct: 40 SKGRQNKNERKSRKLLGKLGLKPVEGITKVCIKKSKQVFFVVNKPDVYKLPNSDTYIIFG 99
Query: 434 EAKIEDLSQQATMAAAER 487
EAK+ED+ Q + + AA+R
Sbjct: 100 EAKVEDMGQNSALEAAQR 117
>UniRef50_P0C2C7 Cluster: Nascent polypeptide-associated complex
subunit alpha; n=17; Ascomycota|Rep: Nascent
polypeptide-associated complex subunit alpha -
Aspergillus terreus (strain NIH 2624)
Length = 202
Score = 103 bits (248), Expect = 2e-21
Identities = 52/100 (52%), Positives = 69/100 (69%)
Frame = +2
Query: 188 LEDAGAPGAGGISNPIAGIDIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNI 367
+EDAG+ + A SR EKKARK + KLGLKLV G+ RVT R+ KNI
Sbjct: 19 VEDAGSDSESEAGEEPTIPGGAAVAVHSRNEKKARKAIGKLGLKLVPGITRVTFRRPKNI 78
Query: 368 LFVINNPDVFKNPHSDTYIVFGEAKIEDLSQQATMAAAER 487
LFVIN P+V+++P S+T+I+FGEAKIEDL+ QA +AA++
Sbjct: 79 LFVINQPEVYRSPSSNTWIIFGEAKIEDLNAQAQASAAQQ 118
>UniRef50_Q45FF9 Cluster: Nascent polypeptide-associated complex
subunit alpha; n=1; Babesia divergens|Rep: Nascent
polypeptide-associated complex subunit alpha - Babesia
divergens
Length = 197
Score = 102 bits (245), Expect = 5e-21
Identities = 43/77 (55%), Positives = 62/77 (80%)
Frame = +2
Query: 257 KAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGE 436
K +Q + E+K+RK++ KLG+K V GV +V I+KSK I FV+N PDV+K P+SDTY++FGE
Sbjct: 32 KNRQDKNERKSRKLLGKLGMKPVDGVTKVCIKKSKQIYFVVNKPDVYKLPNSDTYVIFGE 91
Query: 437 AKIEDLSQQATMAAAER 487
AK+ED+SQ + + AA+R
Sbjct: 92 AKVEDMSQNSALEAAQR 108
>UniRef50_Q4N187 Cluster: Nascent polypeptide associated complex
alpha subunit, putative; n=2; Theileria|Rep: Nascent
polypeptide associated complex alpha subunit, putative -
Theileria parva
Length = 200
Score = 99.5 bits (237), Expect = 5e-20
Identities = 48/88 (54%), Positives = 63/88 (71%)
Frame = +2
Query: 224 SNPIAGIDIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKN 403
++PI G K K + E+KARK MSKLGLK +GV+++ IRKSK I FVIN PDVFK
Sbjct: 42 TDPIHG---TGKTKVGKNERKARKAMSKLGLKQYEGVSKIYIRKSKQIFFVINKPDVFKL 98
Query: 404 PHSDTYIVFGEAKIEDLSQQATMAAAER 487
P+SD Y++FGEAK+ED+ + AA+R
Sbjct: 99 PNSDIYVIFGEAKLEDVGANSQSEAAQR 126
>UniRef50_Q5K8B4 Cluster: Nascent polypeptide-associated complex
subunit alpha; n=2; Filobasidiella neoformans|Rep:
Nascent polypeptide-associated complex subunit alpha -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 191
Score = 89.0 bits (211), Expect = 7e-17
Identities = 39/70 (55%), Positives = 56/70 (80%)
Frame = +2
Query: 269 SRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKIE 448
SR E+KARK + LGLK VQG+ RVT+R+++N+L V+++P+V+K+P SD YIVFGEAK+E
Sbjct: 24 SRPERKARKALEGLGLKRVQGIQRVTLRRARNVLLVVSSPEVYKSPGSDCYIVFGEAKVE 83
Query: 449 DLSQQATMAA 478
D + A + A
Sbjct: 84 DPNSAAQLQA 93
>UniRef50_Q9VPV7 Cluster: CG4415-PA; n=3; Sophophora|Rep: CG4415-PA
- Drosophila melanogaster (Fruit fly)
Length = 347
Score = 88.2 bits (209), Expect = 1e-16
Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 5/83 (6%)
Frame = +2
Query: 260 AKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEA 439
+KQSRGE+KAR+I+ KL LK ++ V RVT++K KNIL I+ PDV++ HS TYI FGE
Sbjct: 186 SKQSRGERKARRILMKLDLKPMENVARVTMKKGKNILLYIDQPDVYRVAHSSTYIFFGEI 245
Query: 440 KIEDLS-----QQATMAAAERFK 493
+ED S QA + AAERF+
Sbjct: 246 CVEDTSTTSVASQAAVKAAERFR 268
>UniRef50_Q4P341 Cluster: Nascent polypeptide-associated complex
subunit alpha; n=1; Ustilago maydis|Rep: Nascent
polypeptide-associated complex subunit alpha - Ustilago
maydis (Smut fungus)
Length = 190
Score = 87.8 bits (208), Expect = 2e-16
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +2
Query: 236 AGIDIVSKAK-QSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHS 412
AG D+ + K SR E+K+RK + +GLK V G+ RVT+R+ + L+VI P+V+K+ HS
Sbjct: 25 AGADVHASDKVASRAERKSRKALQGIGLKKVGGITRVTMRRPRGHLYVIAQPEVYKSSHS 84
Query: 413 DTYIVFGEAKIEDLSQQATMAAAER 487
D YIVFGEAK ED+SQ A AA++
Sbjct: 85 DVYIVFGEAKAEDMSQLAQAQAAQQ 109
>UniRef50_A0BPX1 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_12, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 200
Score = 79.0 bits (186), Expect = 8e-14
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Frame = +2
Query: 224 SNPIAGIDIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKN 403
+NP G D KA +RGEKK RK M KLG+K V G+NRVTI++ K L I+NP+V K+
Sbjct: 47 NNPKGGDDKDKKA--NRGEKKFRKAMLKLGMKPVAGINRVTIKRGKQFLLYIDNPEVLKS 104
Query: 404 PHSD-TYIVFGEAKIEDLSQQATMAAAE 484
+ D +YIV GEAK+ D + Q AE
Sbjct: 105 ANVDNSYIVIGEAKVHDPTGQIGKKEAE 132
>UniRef50_A2ZWW9 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 348
Score = 73.3 bits (172), Expect = 4e-12
Identities = 37/65 (56%), Positives = 52/65 (80%), Gaps = 2/65 (3%)
Frame = +2
Query: 248 IVSK-AKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNP-DVFKNPHSDTY 421
+V+K +KQSR EKK+RK M KLG+K V GV+R+TI ++KNILFV++ P DVFK+P S++
Sbjct: 275 VVNKGSKQSRSEKKSRKAMMKLGMKPVTGVSRITIERAKNILFVVSKPHDVFKSPTSESA 334
Query: 422 IVFGE 436
+ F E
Sbjct: 335 LGFFE 339
>UniRef50_Q6CDH0 Cluster: Nascent polypeptide-associated complex
subunit alpha; n=1; Yarrowia lipolytica|Rep: Nascent
polypeptide-associated complex subunit alpha - Yarrowia
lipolytica (Candida lipolytica)
Length = 198
Score = 72.1 bits (169), Expect = 9e-12
Identities = 33/69 (47%), Positives = 52/69 (75%)
Frame = +2
Query: 278 EKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKIEDLS 457
EK AR ++SKL L+ V+G+ RV +++++ +FVI NP+V+K P ++Y+VFGEA+ ED+
Sbjct: 30 EKAARALISKLNLQKVEGITRVVLKRTRQHIFVIANPEVYKTPTGNSYVVFGEAQHEDM- 88
Query: 458 QQATMAAAE 484
QAT AA+
Sbjct: 89 -QATARAAQ 96
>UniRef50_A7KN23 Cluster: Nascent polypeptide-associated complex
subunit alpha; n=8; Melampsora medusae f. sp.
deltoidis|Rep: Nascent polypeptide-associated complex
subunit alpha - Melampsora medusae f. sp. deltoidis
Length = 181
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/62 (56%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +2
Query: 269 SRGEKKARKIMSKLGLKLVQGVNRVTIRKSKN-ILFVINNPDVFKNPHSDTYIVFGEAKI 445
++ E+KARK ++KLGLK V G+NRVT+RK K+ FVI N +VFK+ ++ YIVFGEAK
Sbjct: 31 NKSERKARKTLAKLGLKKVLGINRVTMRKFKSQQFFVIANAEVFKSATANVYIVFGEAKT 90
Query: 446 ED 451
E+
Sbjct: 91 EE 92
>UniRef50_Q7RBD2 Cluster: NAC domain, putative; n=7; Plasmodium|Rep:
NAC domain, putative - Plasmodium yoelii yoelii
Length = 1004
Score = 70.1 bits (164), Expect = 4e-11
Identities = 25/68 (36%), Positives = 53/68 (77%)
Frame = +2
Query: 254 SKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFG 433
++ K S+GE++ARK++ KLGLK + ++V I+KS+ ++F ++N D+++ +D+Y++FG
Sbjct: 900 NRPKMSKGERRARKMLVKLGLKAIPNTHKVIIKKSQKMIFAVSNVDIYQIEGTDSYVIFG 959
Query: 434 EAKIEDLS 457
+AK ++++
Sbjct: 960 DAKTDEIT 967
>UniRef50_P38879 Cluster: Nascent polypeptide-associated complex
subunit alpha; n=11; Saccharomycetales|Rep: Nascent
polypeptide-associated complex subunit alpha -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 69.3 bits (162), Expect = 6e-11
Identities = 32/73 (43%), Positives = 53/73 (72%)
Frame = +2
Query: 269 SRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKIE 448
++ EKKAR+++ KLGLK + G+ RVT RK N ++ I P+VF++ Y+VFGEAK++
Sbjct: 14 NKNEKKARELIGKLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRSA-GGNYVVFGEAKVD 72
Query: 449 DLSQQATMAAAER 487
+ +Q+ +AAA++
Sbjct: 73 NFTQK--LAAAQQ 83
>UniRef50_Q756T5 Cluster: Nascent polypeptide-associated complex
subunit alpha; n=1; Eremothecium gossypii|Rep: Nascent
polypeptide-associated complex subunit alpha - Ashbya
gossypii (Yeast) (Eremothecium gossypii)
Length = 168
Score = 69.3 bits (162), Expect = 6e-11
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = +2
Query: 269 SRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKIE 448
S+ EKKAR+++ K +K + G+ RVT RK N +F I+NPDV+K Y+VFGE K++
Sbjct: 14 SKNEKKARELIQKFSMKPMPGITRVTFRKKNNQIFAIDNPDVYKT-QGGNYVVFGEPKVD 72
Query: 449 DLSQQATMA 475
D +++ A
Sbjct: 73 DFTRRLARA 81
>UniRef50_P87147 Cluster: Nascent polypeptide-associated complex
subunit alpha; n=16; Ascomycota|Rep: Nascent
polypeptide-associated complex subunit alpha -
Schizosaccharomyces pombe (Fission yeast)
Length = 173
Score = 67.3 bits (157), Expect = 2e-10
Identities = 30/62 (48%), Positives = 47/62 (75%)
Frame = +2
Query: 281 KKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKIEDLSQ 460
+KA+K++ KLGLK V+G+ RV +R+ KNIL +IN P V+K+ ++ YIV G+ +ED++
Sbjct: 25 EKAQKLIQKLGLKRVEGITRVAMRRPKNILLIINEPIVYKS-SNNAYIVLGKVTVEDMAA 83
Query: 461 QA 466
QA
Sbjct: 84 QA 85
>UniRef50_Q54U07 Cluster: Putative nascent polypeptide-associated
complex alpha subunit; n=1; Dictyostelium discoideum
AX4|Rep: Putative nascent polypeptide-associated complex
alpha subunit - Dictyostelium discoideum AX4
Length = 160
Score = 66.9 bits (156), Expect = 3e-10
Identities = 28/71 (39%), Positives = 47/71 (66%)
Frame = +2
Query: 263 KQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAK 442
K ++GEKK R+ M KLGL V + RVTI++ + +L V+ P+V+ +P +TY+VFG+
Sbjct: 8 KVTKGEKKTREAMKKLGLAPVSDIFRVTIKQKEGVLVVVAEPEVYASPSGETYVVFGDHS 67
Query: 443 IEDLSQQATMA 475
+D++ + A
Sbjct: 68 FDDIASRLQKA 78
>UniRef50_Q5CRB7 Cluster: Nascent polypeptide associated complex
alpha chain with an NAC domain; n=2;
Cryptosporidium|Rep: Nascent polypeptide associated
complex alpha chain with an NAC domain - Cryptosporidium
parvum Iowa II
Length = 196
Score = 66.1 bits (154), Expect = 6e-10
Identities = 30/74 (40%), Positives = 50/74 (67%)
Frame = +2
Query: 257 KAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGE 436
+ + ++GEKK RK++ KLGLK + +V +R ++ + F I NP+V+ P + +YIVFG+
Sbjct: 37 RPRHNKGEKKNRKLVQKLGLKPLPDFEKVVVRGARGLSFQIVNPEVYCVPGTKSYIVFGD 96
Query: 437 AKIEDLSQQATMAA 478
AK+ED + + AA
Sbjct: 97 AKLEDRNTASQAAA 110
>UniRef50_O97212 Cluster: Possible nascent polypeptide associated
complex subunit, copy 2; n=9; Trypanosomatidae|Rep:
Possible nascent polypeptide associated complex subunit,
copy 2 - Leishmania major
Length = 244
Score = 65.7 bits (153), Expect = 8e-10
Identities = 36/102 (35%), Positives = 62/102 (60%)
Frame = +2
Query: 176 TIPELEDAGAPGAGGISNPIAGIDIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRK 355
++ E+++A A I + ++ AKQS K+ K M+K+GLK + +VTIRK
Sbjct: 74 SVEEVQNAAAMADEEIPT-LEAAEVPQNAKQS---KRYAKAMAKMGLKPEPNITKVTIRK 129
Query: 356 SKNILFVINNPDVFKNPHSDTYIVFGEAKIEDLSQQATMAAA 481
++ F + P+V++ P ++T+++FGEA++ED S A AAA
Sbjct: 130 VGSLSFAMVQPEVYRFPGTNTFVIFGEAQLEDTSALAQEAAA 171
>UniRef50_UPI0000499C9B Cluster: alpha-NAC protein; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: alpha-NAC protein - Entamoeba
histolytica HM-1:IMSS
Length = 437
Score = 56.0 bits (129), Expect = 6e-07
Identities = 28/70 (40%), Positives = 46/70 (65%)
Frame = +2
Query: 254 SKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFG 433
S+ S+GEKKARK + K+GL V V +++++ + FVIN P V+K P S+ Y+V+G
Sbjct: 285 SERVMSKGEKKARKALEKVGLVEVPNVIEFSLKRAGS-KFVINQPAVYKLPSSEHYVVYG 343
Query: 434 EAKIEDLSQQ 463
E + E + ++
Sbjct: 344 EPRNEYMDEK 353
>UniRef50_A2DAU3 Cluster: NAC domain containing protein; n=3;
Trichomonas vaginalis G3|Rep: NAC domain containing
protein - Trichomonas vaginalis G3
Length = 167
Score = 46.8 bits (106), Expect = 4e-04
Identities = 26/74 (35%), Positives = 40/74 (54%)
Frame = +2
Query: 263 KQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAK 442
K +R EKK R + K LK ++ V VT+R ++F + PDVF + YIVFGE
Sbjct: 31 KINRAEKKMRDALLKHNLKELENVTTVTMRAGNQMVFSFSQPDVFY--IDNVYIVFGENN 88
Query: 443 IEDLSQQATMAAAE 484
D + A+ + ++
Sbjct: 89 RSDAASAASQSISD 102
>UniRef50_Q98RX3 Cluster: Putative uncharacterized protein orf68;
n=1; Guillardia theta|Rep: Putative uncharacterized
protein orf68 - Guillardia theta (Cryptomonas phi)
Length = 68
Score = 45.2 bits (102), Expect = 0.001
Identities = 17/61 (27%), Positives = 37/61 (60%)
Frame = +2
Query: 266 QSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKI 445
+++ EKK +K + + L+ + + + I+K+ F+I P+ F N + +++FGEAK+
Sbjct: 6 KNKNEKKIKKNLEQYNLEKIDDIKFIRIKKNNGTDFIIKCPETFLNCKNKNFVIFGEAKL 65
Query: 446 E 448
+
Sbjct: 66 D 66
>UniRef50_UPI00005A170F Cluster: PREDICTED: similar to nascent
polypeptide-associated complex alpha polypeptide; n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to
nascent polypeptide-associated complex alpha polypeptide
- Canis familiaris
Length = 167
Score = 39.9 bits (89), Expect = 0.043
Identities = 26/55 (47%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 425 VFGEAKIEDLSQQATMAAAERFKXXXXXXXXXXXXXXXXXXXPIAEEEHE-EGVD 586
V GEAKIEDLSQQA +AA ++FK P A+EE E EGVD
Sbjct: 74 VLGEAKIEDLSQQAQLAATDKFK----VQGEAVSNIQENTQTPTAQEESEKEGVD 124
>UniRef50_UPI0000D9A813 Cluster: PREDICTED: similar to nascent
polypeptide-associated complex alpha polypeptide; n=1;
Macaca mulatta|Rep: PREDICTED: similar to nascent
polypeptide-associated complex alpha polypeptide -
Macaca mulatta
Length = 408
Score = 39.5 bits (88), Expect = 0.057
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2
Query: 431 GEAKIEDLSQQATMAAAERFK 493
GEAKIEDLSQQA +AAAE+FK
Sbjct: 317 GEAKIEDLSQQAQLAAAEKFK 337
>UniRef50_A3QTT0 Cluster: ORF121; n=3; Koi herpesvirus|Rep: ORF121 -
Koi herpesvirus
Length = 299
Score = 36.3 bits (80), Expect = 0.53
Identities = 21/91 (23%), Positives = 41/91 (45%)
Frame = +2
Query: 221 ISNPIAGIDIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFK 400
I NP A + + + Q + A + + + L + + I+ K+ V+ + ++
Sbjct: 111 IKNPNANVQVFRENCQKLNQVAATLMSESVDVSLTKSLMASLIKDLKSPPMVVESTELVS 170
Query: 401 NPHSDTYIVFGEAKIEDLSQQATMAAAERFK 493
H+ ++ I D SQQA +AAA + K
Sbjct: 171 GVHAQMQVIKSLYNISDASQQAAVAAAAKKK 201
>UniRef50_Q23PS1 Cluster: Response regulator receiver domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Response regulator receiver domain containing
protein - Tetrahymena thermophila SB210
Length = 1709
Score = 35.9 bits (79), Expect = 0.70
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Frame = +2
Query: 224 SNPIAGIDIVSKAKQSRGEKKARKIMSKLGLKLVQGV----NRVTIRKSKNILFVINNPD 391
SN ++GI+IV K ++ EKKA+K + L + V + R + K + I N
Sbjct: 849 SNQMSGIEIVKKIREYEAEKKAKKTQNLLKFQQVSNIIQIKKRYIVGMFKQLNETIANGQ 908
Query: 392 VFKNPHSDTYIVFGEAKIEDLSQQATMAAAERFK 493
+P F E I+ L + + ER K
Sbjct: 909 KQNSPEKYKDDGFDEVIIKPLERNQVIQLVERIK 942
>UniRef50_Q7QS46 Cluster: GLP_74_26418_26011; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_74_26418_26011 - Giardia lamblia
ATCC 50803
Length = 135
Score = 35.1 bits (77), Expect = 1.2
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 296 IMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKIEDLS 457
++ KL L V+GV++V + K+ + ++ NP + TY+V GE + +++
Sbjct: 8 LVEKLKLVKVEGVDKVVFIRGKHEFTINEGLQIYYNPKTKTYVVGGEPRSNEMA 61
>UniRef50_Q4UDF4 Cluster: Transcription factor btf3 homolog,
putative; n=3; Piroplasmida|Rep: Transcription factor
btf3 homolog, putative - Theileria annulata
Length = 164
Score = 35.1 bits (77), Expect = 1.2
Identities = 14/60 (23%), Positives = 31/60 (51%)
Frame = +2
Query: 278 EKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKIEDLS 457
+K+ + + +G + G+ V I K +NP + P+++TY++ G + ++LS
Sbjct: 55 DKRLQFALRSIGAANIPGIEEVQILKEDGTFLTFSNPKIQTAPNANTYVITGVVEEKELS 114
>UniRef50_A0CH86 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_18, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 168
Score = 34.3 bits (75), Expect = 2.1
Identities = 14/65 (21%), Positives = 34/65 (52%)
Frame = +2
Query: 266 QSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKI 445
Q +KK ++++ K G++ + ++ V K N + + P+V S+T+ +FG +
Sbjct: 44 QINDDKKLKQVIKKFGVQQLGNIDEVNFFKDDNTIIHFSKPEVQAAIGSNTFAIFGNPET 103
Query: 446 EDLSQ 460
+ ++
Sbjct: 104 KKFAE 108
>UniRef50_Q96K17 Cluster: Transcription factor BTF3 homolog 4; n=59;
Eukaryota|Rep: Transcription factor BTF3 homolog 4 -
Homo sapiens (Human)
Length = 158
Score = 33.5 bits (73), Expect = 3.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = +2
Query: 278 EKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEAKIEDLS 457
+KK + + KL + + G+ V + K + NNP V + ++T+ + G A+ + ++
Sbjct: 36 DKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPIT 95
Query: 458 Q 460
+
Sbjct: 96 E 96
>UniRef50_Q01C74 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 228
Score = 33.1 bits (72), Expect = 4.9
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = -2
Query: 466 GLL*QILDLRLSKYYVSVRVWVLEDIRIVDHKEYVL*FPYCNSVYTLYKLEAKFAHDFAR 287
GL QIL LRL++ V VR + + + +VD + +L +++ L L+ + H AR
Sbjct: 146 GLRGQILHLRLTEDDVRVRAFGVVHVGLVDDEHRLLALAKRHALNVLKLLKTELFHRLAR 205
Query: 286 LLLA 275
LLL+
Sbjct: 206 LLLS 209
>UniRef50_UPI0001552931 Cluster: PREDICTED: similar to ADIR1; n=1;
Mus musculus|Rep: PREDICTED: similar to ADIR1 - Mus
musculus
Length = 303
Score = 32.7 bits (71), Expect = 6.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 554 WELR*CLWQPCHCQRQQFPVP*TSLPLP*W 465
WEL C P HC+ Q+ PVP LP W
Sbjct: 51 WELFSCTLWPDHCEDQETPVPPLGWSLPLW 80
>UniRef50_Q7MQQ4 Cluster: Putative uncharacterized protein; n=1;
Wolinella succinogenes|Rep: Putative uncharacterized
protein - Wolinella succinogenes
Length = 233
Score = 32.7 bits (71), Expect = 6.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 351 LIVTLFTPCTSLRPSLLMILRAFFSPRDCFALDT 250
L+ TLF CTS PS L + F++P++ A T
Sbjct: 15 LVATLFGACTSKEPSSLHVREIFYAPKESLARAT 48
>UniRef50_A7P866 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 505
Score = 32.7 bits (71), Expect = 6.5
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -3
Query: 450 SSIFASPNTM*VSECGFLKTSGLLITKSMFFDFLIVTLFTPCTSLRPSLLMIL 292
S SPN + F+++ G KS+F +FL+ T F TS PSL ++L
Sbjct: 442 SQFHLSPNLF-LHFLQFIRSHGHPFLKSLFLNFLLSTSFLQSTSTTPSLDLVL 493
>UniRef50_Q03696 Cluster: Neuronal-glial cell adhesion molecule
precursor; n=2; Gallus gallus|Rep: Neuronal-glial cell
adhesion molecule precursor - Gallus gallus (Chicken)
Length = 1266
Score = 32.7 bits (71), Expect = 6.5
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 343 YNKEIKEHTLCDQQS*CLQEPTLGHLHSIWRGEDRGSVTASHYGSGREVQGTGNC 507
Y+ + KE T D ++ +++ T G S+ ++GS + S GSG G G C
Sbjct: 1161 YSVKDKEDTQVDSEARPMKDETFGEYRSLESEAEKGSASGSGAGSGVGSPGRGPC 1215
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,498,703
Number of Sequences: 1657284
Number of extensions: 10941971
Number of successful extensions: 29976
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 29109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29966
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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