Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_D01
(587 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12390.1 68416.m01544 nascent polypeptide associated complex ... 122 1e-28
At5g13850.1 68418.m01619 nascent polypeptide-associated complex ... 117 7e-27
At3g49470.1 68416.m05407 nascent polypeptide-associated complex ... 115 2e-26
At1g33040.1 68414.m04068 nascent polypeptide-associated complex ... 115 3e-26
At4g10480.1 68417.m01720 nascent polypeptide associated complex ... 111 3e-25
At4g33530.1 68417.m04765 potassium transporter family protein si... 31 0.57
At5g51490.1 68418.m06386 pectinesterase family protein contains ... 28 4.0
At3g02740.1 68416.m00266 aspartyl protease family protein contai... 28 4.0
At2g39830.1 68415.m04892 LIM domain-containing protein contains ... 28 4.0
At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:71... 28 4.0
At1g68100.1 68414.m07779 IAA-alanine resistance protein 1, putat... 28 5.3
At1g12790.1 68414.m01485 expressed protein 28 5.3
At5g56020.1 68418.m06990 expressed protein 27 7.0
At5g54050.1 68418.m06722 DC1 domain-containing protein 27 7.0
At4g26550.1 68417.m03824 expressed protein probable membrane pro... 27 7.0
>At3g12390.1 68416.m01544 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 203
Score = 122 bits (295), Expect = 1e-28
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = +2
Query: 257 KAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGE 436
K+KQSR EKK+RK M KLG+K + GV+RVT++KSKNILFVI+ PDVFK+P SDTY++FGE
Sbjct: 56 KSKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGE 115
Query: 437 AKIEDLSQQATMAAAERFKXXXXXXXXXXXXXXXXXXXPIAEEEHEEGVD 586
AKIEDLS Q AAE+FK EE EEGV+
Sbjct: 116 AKIEDLSSQIQSQAAEQFKAPDLSNVISKGESSSAAVVQDDEEVDEEGVE 165
>At5g13850.1 68418.m01619 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 159
Score = 117 bits (281), Expect = 7e-27
Identities = 54/79 (68%), Positives = 67/79 (84%)
Frame = +2
Query: 257 KAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGE 436
++KQSR EKK+RK M KLG+K + GV+RVT++KSKNILFVI+ PDVFK+P SDTY++FGE
Sbjct: 52 RSKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGE 111
Query: 437 AKIEDLSQQATMAAAERFK 493
AKIEDLS Q AAE+FK
Sbjct: 112 AKIEDLSSQLQSQAAEQFK 130
>At3g49470.1 68416.m05407 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 217
Score = 115 bits (277), Expect = 2e-26
Identities = 54/110 (49%), Positives = 72/110 (65%)
Frame = +2
Query: 248 IVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIV 427
+ +KQSR EKK+RK M KLG+K V GV+RVTI+++KN+LF I+ PDVFK+PHS+TY++
Sbjct: 63 VSGSSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNVLFFISKPDVFKSPHSETYVI 122
Query: 428 FGEAKIEDLSQQATMAAAERFKXXXXXXXXXXXXXXXXXXXPIAEEEHEE 577
FGEAKIEDLS Q AA++F+ EE+ EE
Sbjct: 123 FGEAKIEDLSSQLQTQAAQQFRMPEIGATSQRAEASTATVEAQVEEDEEE 172
>At1g33040.1 68414.m04068 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 209
Score = 115 bits (276), Expect = 3e-26
Identities = 55/109 (50%), Positives = 76/109 (69%)
Frame = +2
Query: 260 AKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEA 439
AKQSR EKK+RK + KLG+K V V+RVTI+++KN+LFVI+ PDV+K+P+++TY++FGEA
Sbjct: 59 AKQSRSEKKSRKAVLKLGMKPVSDVSRVTIKRAKNVLFVISKPDVYKSPNAETYVIFGEA 118
Query: 440 KIEDLSQQATMAAAERFKXXXXXXXXXXXXXXXXXXXPIAEEEHEEGVD 586
K++DLS Q AA+RFK P+AEEE E+ VD
Sbjct: 119 KVDDLSSQLQTQAAQRFK-MPDVTSMLPNAGSEATMAPLAEEEDEDDVD 166
>At4g10480.1 68417.m01720 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 212
Score = 111 bits (268), Expect = 3e-25
Identities = 56/109 (51%), Positives = 73/109 (66%)
Frame = +2
Query: 260 AKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVINNPDVFKNPHSDTYIVFGEA 439
+KQSR EKK+RK M KLG+K V V+RVTI++SKN+LFVI+ PDVFK+P+S+TY++FGEA
Sbjct: 62 SKQSRSEKKSRKAMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYVIFGEA 121
Query: 440 KIEDLSQQATMAAAERFKXXXXXXXXXXXXXXXXXXXPIAEEEHEEGVD 586
KI+D+S Q AA+RFK EEE +E VD
Sbjct: 122 KIDDMSSQLQAQAAQRFKMPDVASMIPNTDGSEAATV-AQEEEDDEDVD 169
>At4g33530.1 68417.m04765 potassium transporter family protein
similar to K+ transporter HAK5 [Arabidopsis thaliana]
GI:7108597; KUP/HAK/KT Transporter family member,
PMID:11500563; contains Pfam profile PF02705: K+
potassium transporter
Length = 855
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = -3
Query: 489 NLSAAAIVACCDRSSIFASPNTM*VSECGFLKTSGLLITKSMFF----DFLIVTLF 334
+L ++ C S+IFA N ++E G + T+ +L+T M + ++V++F
Sbjct: 480 SLLVVCLIVVCSTSNIFAIGNAYGIAELGIMMTTTILVTLIMLLIWQTNIIVVSMF 535
>At5g51490.1 68418.m06386 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 536
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -2
Query: 328 LYKLEAKFAHDFARLLLATRLLCFGHDINACDGVRNTPCP-RCACIFKFRDG 176
+ KL F H +LL L D N+ D TP P C C FK +G
Sbjct: 5 MQKLSILFLHLILLVLLCVHPLTTVADRNSTDWCDKTPYPDPCKCYFKNHNG 56
>At3g02740.1 68416.m00266 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 488
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 174 TPSRNLKMQAHLGQGVFLTPSQALISCPKQSSLV 275
TPSR+ +Q G + I CP++S LV
Sbjct: 93 TPSRDFHVQVDTGSDILWVNCAGCIRCPRKSDLV 126
>At2g39830.1 68415.m04892 LIM domain-containing protein contains
Pfam profile PF00412: LIM domain
Length = 503
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +1
Query: 274 WREEGAQNHEQTWPQACTRCKQSYNKEIKEHTLCDQQS*CLQ 399
W ++ +HE C C++ + +++ +TL D +S CL+
Sbjct: 217 WNQKYCPSHEYDKTARCCSCERLESWDVRYYTLEDGRSLCLE 258
>At1g58250.1 68414.m06624 SABRE, putative similar to SABRE
(GI:719291) [Arabidopsis thaliana]
Length = 2603
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 307 TWPQACTRCKQSYNKEIKEHTLCDQQS*CLQEPTLGHLHSIWR 435
T P+AC R K S + EI + + C + + LG SI++
Sbjct: 670 TAPEACKRLKYSVSLEISQFSFCLNKDKLSTQMELGRAKSIYQ 712
>At1g68100.1 68414.m07779 IAA-alanine resistance protein 1, putative
similar to IAA-alanine resistance protein 1 [Arabidopsis
thaliana] SWISS-PROT:Q9M647; contains ZIP Zinc
transporter domain, Pfam:PF02535; identical to cDNA
IAA-alanine resistance protein 1 mRNA GI:6942042
Length = 469
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 417 VSECGFLKTSGLLITKSMFFDFLIVTLFTPCTSL 316
+ + G L SG +TK++FF+FL + T+L
Sbjct: 370 IGDFGILVRSGFTVTKALFFNFLSALVALAGTAL 403
>At1g12790.1 68414.m01485 expressed protein
Length = 250
Score = 27.9 bits (59), Expect = 5.3
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +2
Query: 200 GAPGAGGISNPIAGIDIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNILFVI 379
G P +++ G + + K SRG K +K+ SKL ++ + V I I FV
Sbjct: 134 GKPAFVQVTDAEMGFEKIVKIAHSRGVCKQQKVASKLKVERKRTVQDTNI----FIRFVT 189
Query: 380 NNPDVFKNPHSDTYIVFG 433
+ P++ K+ + Y G
Sbjct: 190 SIPNINKHDANTLYQAIG 207
>At5g56020.1 68418.m06990 expressed protein
Length = 230
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 387 GLLITKSMFFDFLIVTLFTPCTSLRPSLLMI 295
GLL+ +FF F+ T+F P L P I
Sbjct: 99 GLLLASGVFFIFIAFTMFLPVMVLMPQKFAI 129
>At5g54050.1 68418.m06722 DC1 domain-containing protein
Length = 580
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Frame = +1
Query: 316 QACTRCKQSYNKEIKEH----TLCDQQS*CLQEPTL 411
Q+ RC Q+ NKEIK+ T+CD+ S C++ TL
Sbjct: 429 QSSRRC-QACNKEIKDDPLNCTVCDEYSLCMRCATL 463
>At4g26550.1 68417.m03824 expressed protein probable membrane
protein YBL102w, yeast, PIR2:S45393
Length = 225
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 387 GLLITKSMFFDFLIVTLFTPCTSLRPSLLMI 295
GLL+ +FF F+ T+F P L P I
Sbjct: 94 GLLLASGVFFIFIAFTMFLPVMVLMPQKFAI 124
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,519,127
Number of Sequences: 28952
Number of extensions: 250411
Number of successful extensions: 751
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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