Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C24
         (457 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    25   0.39 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.8  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   4.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   4.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.8  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   6.3  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 203 TSSGQRVAVVDTSDNECCHGLSQTIQCG 286
           TS  + V V D    ECC  L   + CG
Sbjct: 185 TSYFKVVVVEDVDSVECCGALKNIVACG 212


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -3

Query: 251 IRYLRYPQPLPADHCSSFKRFFKDIRIGGAARDI 150
           + +L YP  +  D  +    +  DI +  A RD+
Sbjct: 309 VTFLCYPSVMNLDDLTRRSLYLSDIPLHDATRDL 342


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 63  RALCRGLCHPPVIS 104
           RA CR   HP V S
Sbjct: 32  RAFCRNCIHPTVFS 45


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 63  RALCRGLCHPPVIS 104
           RA CR   HP V S
Sbjct: 480 RAFCRNCIHPTVFS 493


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -3

Query: 251 IRYLRYPQPLPADHCSSFKRFFKDIRIGGAARDI 150
           + +L YP  +  D  +    +  DI +  A RD+
Sbjct: 309 VTFLCYPSVMNLDDLTRRSLYLSDIPLHDATRDL 342


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 18  RNSARGATLGPRPSQRALCRGL 83
           + S  G   GP P+Q+A  R L
Sbjct: 378 QKSTTGPPPGPTPAQKARMRAL 399


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,358
Number of Sequences: 438
Number of extensions: 2454
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)