Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_C23
(482 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0963 - 12769715-12769859,12770639-12770889 91 3e-19
07_03_1662 + 28447419-28447666,28448429-28448573 89 2e-18
10_06_0052 + 10106778-10107017,10107420-10107969,10108134-101083... 32 0.28
01_02_0106 - 11175200-11175385,11175463-11175496,11175987-111762... 31 0.37
01_03_0093 - 12422558-12422607,12422679-12422935,12423565-124239... 31 0.48
11_01_0639 - 5128139-5128159,5128237-5128329,5128431-5128491,512... 31 0.64
05_03_0070 - 8023343-8023528,8023606-8023639,8024013-8024058,802... 31 0.64
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 31 0.64
03_05_0594 + 25981587-25981826,25981912-25982160,25982257-259838... 31 0.64
03_05_0190 - 21770610-21770641,21770741-21770811,21771058-217711... 31 0.64
02_03_0365 - 18198669-18198809,18198887-18198979,18199078-181991... 31 0.64
12_01_0633 - 5241098-5241283,5241361-5241453,5241555-5241615,524... 30 0.85
11_04_0403 + 17298498-17298713,17298799-17299696,17299874-173005... 30 0.85
07_03_1296 + 25583195-25584385 30 0.85
02_02_0223 - 8021040-8021247,8022275-8022367,8022808-8023059,802... 30 0.85
09_04_0430 + 17502387-17503505 29 1.5
08_02_1012 + 23550314-23551504 29 1.5
10_06_0188 - 11603941-11604528 29 2.0
09_02_0195 + 5643549-5645090 29 2.0
09_02_0126 + 4582214-4582453,4582539-4584201,4584244-4584584,458... 29 2.0
04_04_0359 + 24679907-24680146,24680511-24680939,24681111-246824... 29 2.0
10_06_0119 - 10956190-10956754,10956984-10957139,10958402-10958622 29 2.6
08_01_0985 - 9960064-9960249,9960327-9960419,9960518-9960578,996... 28 3.4
10_02_0126 - 5543658-5543670,5543748-5543840,5544344-5544529,554... 28 4.5
07_03_0316 + 16684100-16684339,16684425-16685132,16685241-166859... 28 4.5
11_01_0763 + 6402901-6403971,6404581-6404826 27 6.0
11_06_0037 - 19478885-19480472,19483125-19483267 27 7.9
10_05_0093 - 9108883-9109068,9109156-9109248,9109363-9109441,910... 27 7.9
07_01_0806 - 6308383-6308856 27 7.9
03_02_0927 - 12452262-12452428,12452538-12452607,12452689-124528... 27 7.9
>03_02_0963 - 12769715-12769859,12770639-12770889
Length = 131
Score = 91.5 bits (217), Expect = 3e-19
Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Frame = +3
Query: 144 SLKFTIDCTHPAEDSILDVGNFEKYLKERVKVE-GKTNNLGNHVVIARDKTKVAINADIP 320
S+ F IDC P +D I+++ + EK+L+ER+KV GK NLG V ++RDKTKV + +D P
Sbjct: 21 SVTFVIDCAKPVDDKIMEIASLEKFLQERIKVAGGKAGNLGESVTVSRDKTKVTVTSDGP 80
Query: 321 FSXXXXXXXXXXXXXXXXXXDWLRVVASAHDS--YELRYF 434
FS DWLRV+AS D YELRYF
Sbjct: 81 FSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYF 120
>07_03_1662 + 28447419-28447666,28448429-28448573
Length = 130
Score = 89.0 bits (211), Expect = 2e-18
Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Frame = +3
Query: 144 SLKFTIDCTHPAEDSILDVGNFEKYLKERVKVE-GKTNNLGNHVVIARDKTKVAINADIP 320
S+ F IDC+ P ED I+++ + EK+L+ER+KV GK NLG+ V + RDKTKV + +D
Sbjct: 20 SVSFVIDCSKPVEDKIMEIASLEKFLQERIKVAGGKAGNLGDSVTVTRDKTKVTVTSDGA 79
Query: 321 FSXXXXXXXXXXXXXXXXXXDWLRVVASAHDS--YELRYF 434
FS DWLRV+A+ D YELRYF
Sbjct: 80 FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYF 119
>10_06_0052 +
10106778-10107017,10107420-10107969,10108134-10108358,
10108552-10108865,10108880-10109214,10109298-10109549,
10109630-10109740,10109828-10109888,10110038-10110130,
10110208-10110264
Length = 745
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RSK W +R
Sbjct: 179 EEMRKKGQPVLMEEWTQRSKNWVRAR 204
>01_02_0106 -
11175200-11175385,11175463-11175496,11175987-11176247,
11176501-11176831,11176899-11177589,11177611-11178156,
11178441-11178680
Length = 762
Score = 31.5 bits (68), Expect = 0.37
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RS+ W +R
Sbjct: 180 EEMRKKRQPVPMEEWIQRSRNWVRAR 205
>01_03_0093 -
12422558-12422607,12422679-12422935,12423565-12423932,
12423939-12424800,12425247-12425464
Length = 584
Score = 31.1 bits (67), Expect = 0.48
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RS+ W +R
Sbjct: 167 EEMRKKGQPVPMEEWTQRSRNWARAR 192
>11_01_0639 -
5128139-5128159,5128237-5128329,5128431-5128491,
5128579-5128689,5128770-5129021,5129105-5129440,
5129486-5131140,5131316-5131555
Length = 922
Score = 30.7 bits (66), Expect = 0.64
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RS+ W +R
Sbjct: 265 EEMRKKGQPVPMEEWTQRSRNWVRAR 290
>05_03_0070 -
8023343-8023528,8023606-8023639,8024013-8024058,
8024139-8024389,8024473-8026001,8026128-8026496,
8026582-8026821
Length = 884
Score = 30.7 bits (66), Expect = 0.64
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RS+ W +R
Sbjct: 253 EEMRKKGQPVPMEEWKQRSRNWVRAR 278
>03_05_0791 +
27736978-27737217,27737648-27739191,27739512-27739763,
27739844-27739954,27740042-27740102,27740373-27740558
Length = 797
Score = 30.7 bits (66), Expect = 0.64
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RS+ W +R
Sbjct: 180 EEMRKKGQPVPMEEWTQRSRNWVRAR 205
>03_05_0594 +
25981587-25981826,25981912-25982160,25982257-25983818,
25984139-25984390,25984471-25984581,25984669-25984729,
25984829-25984921,25984999-25985184
Length = 917
Score = 30.7 bits (66), Expect = 0.64
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RS+ W +R
Sbjct: 263 EEMRKKGQPVPMEEWTQRSRNWVRAR 288
>03_05_0190 -
21770610-21770641,21770741-21770811,21771058-21771168,
21771249-21771500,21771584-21772086,21772188-21773234,
21773361-21773768,21773814-21773956,21774020-21774053
Length = 866
Score = 30.7 bits (66), Expect = 0.64
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RS+ W +R
Sbjct: 245 EEMRKKGQPVPMEEWTQRSRNWVRAR 270
>02_03_0365 -
18198669-18198809,18198887-18198979,18199078-18199138,
18199291-18199336,18199417-18199682,18199766-18200744,
18201012-18201564,18201661-18201909,18201995-18202234
Length = 875
Score = 30.7 bits (66), Expect = 0.64
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RS+ W +R
Sbjct: 263 EEMRKKGQPVPMEEWTQRSRNWVRAR 288
>12_01_0633 -
5241098-5241283,5241361-5241453,5241555-5241615,
5241703-5241813,5241960-5242145,5242229-5242590,
5242730-5243152,5243159-5244382,5244468-5244707
Length = 961
Score = 30.3 bits (65), Expect = 0.85
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RS+ W R
Sbjct: 295 EEMRKKGQPVPMEEWTQRSRNWVRGR 320
>11_04_0403 +
17298498-17298713,17298799-17299696,17299874-17300592,
17301714-17301806,17301884-17302051
Length = 697
Score = 30.3 bits (65), Expect = 0.85
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RS+ W +R
Sbjct: 287 EEMRKKGQPVPIEEWTQRSRNWVRAR 312
>07_03_1296 + 25583195-25584385
Length = 396
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 148 RLIFLLAPLPRILPPFTPFLPVFWCNWPFFATGFFVTAILAT 23
R F+ +P PP P +++C W F+ GF A L+T
Sbjct: 181 RRAFVATEIPAA-PPIVPGTDMYYCAWGFYPMGFPKAADLST 221
>02_02_0223 -
8021040-8021247,8022275-8022367,8022808-8023059,
8023143-8023597,8023667-8023983,8024019-8024298,
8024423-8024728,8024762-8025130,8025216-8025455
Length = 839
Score = 30.3 bits (65), Expect = 0.85
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RS+ W R
Sbjct: 284 EEMRKKGQPVPMEEWTQRSRNWDKLR 309
>09_04_0430 + 17502387-17503505
Length = 372
Score = 29.5 bits (63), Expect = 1.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 109 PPFTPFLPVFWCNWPFFATGF 47
PP P +++C W FF GF
Sbjct: 270 PPIVPGTDMYYCTWGFFPVGF 290
>08_02_1012 + 23550314-23551504
Length = 396
Score = 29.5 bits (63), Expect = 1.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 109 PPFTPFLPVFWCNWPFFATGF 47
PP P +++C+W FF GF
Sbjct: 264 PPIVPGTDMYYCSWGFFPMGF 284
>10_06_0188 - 11603941-11604528
Length = 195
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 148 RLIFLLAPLPRILPPFTPFLPVFWCNWPFFATG 50
R F A LP PP P +++C W FF G
Sbjct: 45 RRAFSAAELPAA-PPIVPGTDMYFCTWAFFPLG 76
>09_02_0195 + 5643549-5645090
Length = 513
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 115 ILPPFTPFLPVFWCNWPFFAT 53
ILPP P LP+ W +W AT
Sbjct: 152 ILPPSNPTLPMQWIDWEALAT 172
>09_02_0126 +
4582214-4582453,4582539-4584201,4584244-4584584,
4584809-4584999,4585080-4585190,4585278-4585338,
4585610-4585795
Length = 930
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
++ R+K +PV E+W +RS+ W +R
Sbjct: 295 EKMRKKGQPVPMEEWTQRSRNWVRAR 320
>04_04_0359 +
24679907-24680146,24680511-24680939,24681111-24682402,
24682486-24682737,24682818-24682928,24683016-24683076,
24683178-24683270,24683348-24683533
Length = 887
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSRQR 127
+E R+K + V E+W +RS+ W R R
Sbjct: 202 EEMRKKRQLVPMEEWTQRSRNWHGGRVR 229
>10_06_0119 - 10956190-10956754,10956984-10957139,10958402-10958622
Length = 313
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 59 KERPVT--PEDW*ERSKRWQNSRQRCQEE 139
+ERPV W ER RW R RC+EE
Sbjct: 243 RERPVRWRRPAWRERRGRWWRRRPRCEEE 271
>08_01_0985 -
9960064-9960249,9960327-9960419,9960518-9960578,
9960667-9960774,9960921-9961106,9961427-9962421,
9962626-9962988,9963085-9963333,9963419-9963574
Length = 798
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSRQ 124
+E R+K +PV E+W RS+ W + ++
Sbjct: 235 EEMRKKGQPVPMEEWTYRSRNWMSWKE 261
>10_02_0126 -
5543658-5543670,5543748-5543840,5544344-5544529,
5544613-5545310,5545323-5546237,5546842-5547081
Length = 714
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E R+K +PV E+W +RS W +R
Sbjct: 122 EEMRKKGQPVPMEEWTQRSGNWVIAR 147
>07_03_0316 +
16684100-16684339,16684425-16685132,16685241-16685939,
16685992-16686053,16686096-16686368,16686622-16686873,
16686954-16687064,16687152-16687212,16687312-16687404,
16687482-16687667
Length = 894
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSRQRCQEED 142
+E R+ +PV E+W RS+ W+ + +E+D
Sbjct: 295 EEMRKMGQPVPMEEWTHRSRNWKGFFKPKREKD 327
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 32 DGSYKEARRKERPVTPEDW*ERSKRWQNSRQRCQEE 139
DG + R + W ER RW R RC+EE
Sbjct: 247 DGGRPDWRERRVRWRRPAWRERRGRWWRRRPRCEEE 282
>11_06_0037 - 19478885-19480472,19483125-19483267
Length = 576
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -2
Query: 235 LTRSFKYFSKLPTSRMLSSAGCVQSMVNLRLIFLLAPLPRILPPFTPFLPVFW 77
L RS+ L S+++ S GC +S V L FLL L + P + +P FW
Sbjct: 365 LPRSWHSSCTLDGSKLVVSGGCTESGVLLSDTFLL-DLTKEKPAWKE-IPTFW 415
>10_05_0093 -
9108883-9109068,9109156-9109248,9109363-9109441,
9109529-9109639,9109715-9109857,9110050-9110522,
9110568-9111075,9111241-9111810,9111883-9112119,
9112196-9112465
Length = 889
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 44 KEARRKERPVTPEDW*ERSKRWQNSR 121
+E +R PV E+W RSK+W +R
Sbjct: 277 EEMKRMGVPVPMENWNVRSKQWMKAR 302
>07_01_0806 - 6308383-6308856
Length = 157
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -3
Query: 216 ISQSCQHPGCYPQQ---GVCSQW*I*G*SSSWHLCREFCHLLLLSYQSSG 76
+ + C PG +Q G C Q + SSW C H+L + Y+ SG
Sbjct: 59 VKRQCVAPGTVDEQVRRGCCRQ--LAAIDSSWCRCDALNHMLRIIYRESG 106
>03_02_0927 -
12452262-12452428,12452538-12452607,12452689-12452830,
12452937-12453117,12454068-12454203
Length = 231
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 373 IFGTGSEWWLLHMTHMSFATSTS---MLIATMKTTRIKL 480
IFG WWL + +SF T S +++ ++ RIK+
Sbjct: 62 IFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQFIRIKV 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,368,991
Number of Sequences: 37544
Number of extensions: 240966
Number of successful extensions: 751
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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