Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_C22
(373 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 212 9e-56
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 210 3e-55
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 206 6e-54
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 2e-51
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 93 7e-20
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 89 1e-18
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 88 2e-18
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 87 3e-18
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 87 6e-18
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 7e-18
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 1e-17
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 2e-17
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 77 5e-15
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 4e-13
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 65 1e-11
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 9e-09
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 2e-08
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.13
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 32 0.13
SB_33262| Best HMM Match : DOMON (HMM E-Value=2.7e-28) 32 0.13
SB_33803| Best HMM Match : Aminotran_1_2 (HMM E-Value=2.6e-26) 31 0.39
SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.52
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 2.8
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 2.8
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 27 3.7
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.7
SB_53489| Best HMM Match : Pox_F15 (HMM E-Value=3.2) 27 4.9
SB_49525| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=5.2e-10) 27 4.9
SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7) 27 4.9
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_6531| Best HMM Match : EGF_2 (HMM E-Value=0.0016) 27 4.9
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 27 6.4
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_11710| Best HMM Match : Urease_alpha (HMM E-Value=0) 26 8.5
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 212 bits (517), Expect = 9e-56
Identities = 94/99 (94%), Positives = 97/99 (97%)
Frame = +2
Query: 77 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKY 256
KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKY
Sbjct: 213 KMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY 272
Query: 257 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 373
VPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG
Sbjct: 273 VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 311
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 210 bits (513), Expect = 3e-55
Identities = 94/98 (95%), Positives = 96/98 (97%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 373
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 98
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 206 bits (502), Expect = 6e-54
Identities = 90/98 (91%), Positives = 96/98 (97%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 373
PR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 98
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 198 bits (482), Expect = 2e-51
Identities = 88/92 (95%), Positives = 90/92 (97%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 355
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 93.1 bits (221), Expect = 7e-20
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 248 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 373
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 43
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 253
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 254 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDA 99
Score = 86.6 bits (205), Expect = 6e-18
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 256
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 257 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA 532
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 87.8 bits (208), Expect = 2e-18
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Frame = +2
Query: 65 FRYIKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNE 238
F I RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 60 FILILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSE 119
Query: 239 ASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A
Sbjct: 120 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA 163
Score = 87.0 bits (206), Expect = 4e-18
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 253
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 254 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA 684
Score = 65.3 bits (152), Expect = 1e-11
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 256
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 257 VPRAILVDLEPGTMDSV 307
VPRA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 87.4 bits (207), Expect = 3e-18
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 253
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 254 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA 99
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 86.6 bits (205), Expect = 6e-18
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 256
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 257 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA 98
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 86.2 bits (204), Expect = 7e-18
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 256
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 257 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDA 517
Score = 69.7 bits (163), Expect = 7e-13
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 125 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLEPGTM 298
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 299 DSVRSGPFGQIFRPDNFVFGQSGA 370
D VR+G + Q+F P+ + G+ A
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDA 84
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 85.4 bits (202), Expect = 1e-17
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 256
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 257 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDA 470
Score = 83.4 bits (197), Expect = 5e-17
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = +2
Query: 83 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 256
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 257 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
VPRA+ DLEP +D VR+G + Q+F P+ + G+ A
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDA 903
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 85.0 bits (201), Expect = 2e-17
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 253
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 254 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA 99
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 77.0 bits (181), Expect = 5e-15
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = +2
Query: 242 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
+GG+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGA 53
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 70.5 bits (165), Expect = 4e-13
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 253
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 254 YVPRAILVDLEPGTMDSVR 310
+VPRA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 65.3 bits (152), Expect = 1e-11
Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 254 YVPRAILVDLEP 289
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 56.0 bits (129), Expect = 9e-09
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +2
Query: 212 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDA 64
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 54.8 bits (126), Expect = 2e-08
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +2
Query: 233 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 370
+EA+ GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDA 1010
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 1e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 247
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 248 GKY 256
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 2e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 137 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 238
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.3 bits (70), Expect = 0.13
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 89 IVHIQAGQCGNQIGAKFWEIISDE 160
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 32.3 bits (70), Expect = 0.13
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 263 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG 373
RA+L+D+E G ++++ GP +F + SG G
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCG 112
>SB_33262| Best HMM Match : DOMON (HMM E-Value=2.7e-28)
Length = 595
Score = 32.3 bits (70), Expect = 0.13
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 163 VLIGDDLPELSSNLVSALSGLDVHDFPHFDISELNKLLNTNIFCSARTTH 14
++I D+L S L + LSG + F H DI L +L T++ TH
Sbjct: 45 LIISDELNHSSLVLGARLSGATIKVFKHNDIKSLENMLRTSVVQGQPRTH 94
>SB_33803| Best HMM Match : Aminotran_1_2 (HMM E-Value=2.6e-26)
Length = 391
Score = 30.7 bits (66), Expect = 0.39
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 163 VLIGDDLPELSSNLVSALSGLDVHDFPHFDISELNKLLNTNIFCSARTTH 14
++I D+L S L + LSG + F H DI L L T++ TH
Sbjct: 188 LIISDELNHSSLVLGARLSGATIKVFKHNDIKSLENKLRTSVVQGQPRTH 237
>SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 30.3 bits (65), Expect = 0.52
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -2
Query: 324 PKGPERTESMVPGSRSTRMARGTYLP--PEA 238
PKGPER E+ + R +G YLP PEA
Sbjct: 838 PKGPERKEACLRALGDIRAEKGVYLPSNPEA 868
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.9 bits (59), Expect = 2.8
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDE---HGIDPTGAYHGDSDLQLERINVYYNEASGG 250
+RE++ +Q G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 251 KYVPRAILVDLE 286
Y PR +L DL+
Sbjct: 83 -YTPRLLLYDLK 93
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 149 ISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 289
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 27.5 bits (58), Expect = 3.7
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -2
Query: 369 APDCPKTKLSGRKICPKGPERTESMVPGSRST 274
A DCP ++ +GR +CP P +S + ++++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 360 CPKTKLSGRKICPKGPERTESMVPGSRSTRMARGTYLPPEA 238
CP+ + RK P G + + G+ S +++G +PP A
Sbjct: 456 CPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_53489| Best HMM Match : Pox_F15 (HMM E-Value=3.2)
Length = 372
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 160 LIGDDLPELSSNLVSALSGLDVHDFPHFDIS 68
+I +DLP+ + L L+ +V DF HF ++
Sbjct: 108 VIDEDLPKCGAVLFRGLNLYEVQDFAHFSLA 138
>SB_49525| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=5.2e-10)
Length = 779
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 361 LSENEVVGPEDLSEGSRADRVHGAGLEV 278
LS VV EDL E + + GAGL+V
Sbjct: 194 LSRGGVVNQEDLYEALKNGEIRGAGLDV 221
>SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7)
Length = 300
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 194 DSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSV 307
D+D ++ + VYYN +S G+ + ++ LVD P + V
Sbjct: 7 DNDYYMQCLTVYYNGSSAGEILCKS-LVDKIPDALQRV 43
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -2
Query: 372 PAPDCPKTKLSGRKICPKGPERTESMVPGSRSTR 271
PA KT LS R+ K E+T S PG+R+TR
Sbjct: 53 PANRLIKTPLSRRE-STKPTEKTGSQTPGNRNTR 85
>SB_6531| Best HMM Match : EGF_2 (HMM E-Value=0.0016)
Length = 407
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 67 ELNKLLNTNIFCSARTTHFRL 5
ELN LNT I+ + T HFRL
Sbjct: 337 ELNHKLNTIIYSKSTTIHFRL 357
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 26.6 bits (56), Expect = 6.4
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 80 MREIVHIQAGQCGNQIGAKFWEIISDEHGID---PTGAYHGDSDLQLERINVYYNEASGG 250
+RE++ +Q G N +G +W I D P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDAASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 251 KYVPRAILVDLE 286
Y PR +L DL+
Sbjct: 83 -YTPRLLLYDLK 93
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 299 DSVRSGPFGQIFRPDNFVFGQSGA 370
D VR+G + Q+F P+ + G+ A
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDA 36
>SB_11710| Best HMM Match : Urease_alpha (HMM E-Value=0)
Length = 726
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 218 INVYYNEASGGKYVPRAILVDLEPGTMDS 304
I+ Y++E +GG + P I V EP + S
Sbjct: 513 IHTYHSEGAGGGHAPDIIRVCSEPNVLPS 541
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,422,302
Number of Sequences: 59808
Number of extensions: 219268
Number of successful extensions: 693
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 607387585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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