Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C21
         (203 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1VR76 Cluster: Putative uncharacterized protein; n=1; ...    31   4.9  
UniRef50_UPI0001509D0F Cluster: conserved hypothetical protein; ...    31   6.5  
UniRef50_UPI0000D55C81 Cluster: PREDICTED: hypothetical protein;...    31   6.5  

>UniRef50_Q1VR76 Cluster: Putative uncharacterized protein; n=1;
          Psychroflexus torquis ATCC 700755|Rep: Putative
          uncharacterized protein - Psychroflexus torquis ATCC
          700755
          Length = 674

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +1

Query: 22 WKLLILVVKNIKIRTIMSTNENNSEV 99
          W+LL  ++KN+K +  M T+EN S++
Sbjct: 5  WELLYNIIKNLKSKLKMETSENTSDI 30


>UniRef50_UPI0001509D0F Cluster: conserved hypothetical protein;
           n=1; Tetrahymena thermophila SB210|Rep: conserved
           hypothetical protein - Tetrahymena thermophila SB210
          Length = 413

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 31  LILVVKNIKIRTIMSTNENNSEVAVDKVNDESKGDAKSDL 150
           LI  +K+IKI+ IMS  + N +     +ND +  D + D+
Sbjct: 14  LIFDIKSIKIKIIMSAQQPNDQFPAKWLNDSNLEDNQKDI 53


>UniRef50_UPI0000D55C81 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 108

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
 Frame = +1

Query: 70  MSTNENNSEVAVDKV-NDESKGDAKSDL 150
           MS+ ENN EVAV+K+ ND+S  DAK +L
Sbjct: 1   MSSKENN-EVAVEKIDNDKSAPDAKCEL 27


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.307    0.126    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,039,520
Number of Sequences: 1657284
Number of extensions: 1249514
Number of successful extensions: 3035
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3034
length of database: 575,637,011
effective HSP length: 47
effective length of database: 497,744,663
effective search space used: 9954893260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)