Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C21
         (203 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_27402| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   0.59 
SB_18561| Best HMM Match : Anti-silence (HMM E-Value=0)                26   4.1  
SB_47532| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   5.5  
SB_26321| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.2  
SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.2  
SB_58243| Best HMM Match : DUF584 (HMM E-Value=1.5)                    25   9.5  
SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.5  

>SB_27402| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 205

 Score = 29.1 bits (62), Expect = 0.59
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +1

Query: 88  NSEVAVDKVNDESKGDAKS 144
           NSE+  DKV DE KGD+ S
Sbjct: 2   NSEIPCDKVTDEPKGDSTS 20


>SB_18561| Best HMM Match : Anti-silence (HMM E-Value=0)
          Length = 170

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 147 VTFRVTFALIVDLVYGHFTVIFIGTHDCSDFD 52
           VTF  T  +  DL    + +I++G+ +CSD+D
Sbjct: 26  VTFECTEEITDDL---DWKIIYVGSAECSDYD 54


>SB_47532| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 674

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 40  VVKNIKIRTIMSTNENNSEVAVDKVNDESKGDAKSD 147
           ++KN+  +     NEN++    +K   +   DAK D
Sbjct: 100 IIKNLNAKVRSKKNENSTPFHFEKNGHKKNSDAKED 135


>SB_26321| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 127

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +1

Query: 64  TIMSTNENNSEVAVDKVNDESKGDAKSD 147
           ++  TN+ NSE+ +DK +D + G ++ D
Sbjct: 23  SVFGTNDTNSEIILDK-DDIASGSSRID 49


>SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 507

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = -3

Query: 144 TFRVTFALIVDLVYGHFTVI--FIG--THDCSDF 55
           T  VTFAL + L+  HF ++  FIG  T  C  F
Sbjct: 417 TLLVTFALFISLIVPHFGLLMGFIGSFTGTCLSF 450


>SB_58243| Best HMM Match : DUF584 (HMM E-Value=1.5)
          Length = 1308

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 7   GSGQPWKLLILVVKNIKIRTIMSTNENNSEVAVDKVNDESKGDAKSD 147
           GSG+P K     +   KI TI   +E  S    ++ ND+   D  S+
Sbjct: 739 GSGEPVKKRKKKISRPKIPTIFYADETKSTEEEEEGNDDIDDDDVSE 785


>SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 947

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 7   GSGQPWKLLILVVKNIKIRTIMSTNENNSEVAVDKVNDESKGDAKSD 147
           GSG+P K     +   KI TI   +E  S    ++ ND+   D  S+
Sbjct: 841 GSGEPVKKRKKKISRPKIPTIFYADETKSTEEEEEGNDDIDDDDVSE 887


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.307    0.126    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,747,060
Number of Sequences: 59808
Number of extensions: 39494
Number of successful extensions: 99
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 16,821,457
effective HSP length: 46
effective length of database: 14,070,289
effective search space used: 295476069
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)