Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C20
         (406 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI150...    35   0.54 
UniRef50_Q8IEL8 Cluster: Putative uncharacterized protein PF13_0...    33   1.6  
UniRef50_Q8I4U7 Cluster: Putative uncharacterized protein; n=21;...    32   5.0  
UniRef50_Q1EVW4 Cluster: Binding-protein-dependent transport sys...    31   8.7  

>UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI1500w;
            n=2; cellular organisms|Rep: Putative uncharacterized
            protein PFI1500w - Plasmodium falciparum (isolate 3D7)
          Length = 4530

 Score = 35.1 bits (77), Expect = 0.54
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = +3

Query: 114  RYYFKYISRNDQHSNTYITYKYTVLNKSYVI*I*ESIKSPYFFQ 245
            + Y KYIS N Q  N    Y Y  +    VI I  S  SPYF +
Sbjct: 1601 KMYVKYISLNKQMQNKETVYYYKWIKSKIVIDIRNSFSSPYFIR 1644


>UniRef50_Q8IEL8 Cluster: Putative uncharacterized protein
           PF13_0053; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF13_0053 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1672

 Score = 33.5 bits (73), Expect = 1.6
 Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
 Frame = +2

Query: 209 NMRVDKKSILFPNIRPYFPLFYSIFDNIY-----LKIQLYVFEMIVIIVSSMRADTYISI 373
           N+R+D+K I F + + YF +   +++NI+     ++I LY++ +I + + S+  D Y  +
Sbjct: 683 NIRIDEKLISFLHKQQYFNISSFLYNNIHCYNNVIRIALYIW-LIQLYIYSI--DLYAYL 739

Query: 374 RRH*AHY*HTK 406
            +  ++Y HTK
Sbjct: 740 YKSTSYYFHTK 750


>UniRef50_Q8I4U7 Cluster: Putative uncharacterized protein; n=21;
            Eukaryota|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 1989

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 373  YRDISIGSHTRNNNNNHFEYVKLD 302
            +RD+ + S+  NNNNN+  YVK++
Sbjct: 1855 FRDLQLNSNNNNNNNNNNNYVKVN 1878


>UniRef50_Q1EVW4 Cluster: Binding-protein-dependent transport
           systems inner membrane component; n=1; Clostridium
           oremlandii OhILAs|Rep: Binding-protein-dependent
           transport systems inner membrane component - Clostridium
           oremlandii OhILAs
          Length = 797

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 200 RDLNMRVDKKSILFPNIRPYFPLFYSIFDNIYLKI 304
           +D++  +  K + F +  PY   FY+I +N+YLKI
Sbjct: 720 KDIHKGLKGKKVKFVSRSPYSQSFYNIGENLYLKI 754


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,140,965
Number of Sequences: 1657284
Number of extensions: 7435964
Number of successful extensions: 20957
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20819
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)