Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C20
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   0.65 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   3.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   3.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   8.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    20   8.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    20   8.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    20   8.0  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    20   8.0  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 0.65
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 249 IFGKSMDFLSTLIFKSRKIYLRLYICR 169
           + G S   ++ L+ KSRK  +  +IC+
Sbjct: 61  VLGNSAVLVALLVSKSRKSRMNFFICQ 87


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 11/54 (20%), Positives = 25/54 (46%)
 Frame = +2

Query: 233 ILFPNIRPYFPLFYSIFDNIYLKIQLYVFEMIVIIVSSMRADTYISIRRH*AHY 394
           I F  ++ YF   +    NIY  ++       +I ++++R      +++H + Y
Sbjct: 2   IKFSKVKSYFTTHHDTLHNIYTSMKPVYAICKLIGLNTLRIGRKGELKQHKSDY 55


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 11/54 (20%), Positives = 25/54 (46%)
 Frame = +2

Query: 233 ILFPNIRPYFPLFYSIFDNIYLKIQLYVFEMIVIIVSSMRADTYISIRRH*AHY 394
           I F  ++ YF   +    NIY  ++       +I ++++R      +++H + Y
Sbjct: 2   IKFSKVKSYFTTHHDTLHNIYTSMKPVYAICKLIGLNTLRIGRKGELKQHKSDY 55


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 70  LMFHGNSEFLLVTFHVIILNTFH 138
           LMF   +      ++VI++ TF+
Sbjct: 67  LMFFKEASLYCFNYYVIVVTTFY 89


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 331 YYCF*YASRYLYL 369
           +YC   AS YLYL
Sbjct: 108 FYCSGLASGYLYL 120


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 331 YYCF*YASRYLYL 369
           +YC   AS YLYL
Sbjct: 108 FYCSGLASGYLYL 120


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 331 YYCF*YASRYLYL 369
           +YC   AS YLYL
Sbjct: 108 FYCSGLASGYLYL 120


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 260 SMDGYLEKVWTFYRLSY 210
           ++D Y  + WT  RL+Y
Sbjct: 87  TLDFYFRQFWTDPRLAY 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,908
Number of Sequences: 336
Number of extensions: 2268
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)