Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_C20
(406 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 25 0.25
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 25 0.25
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 25 0.25
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 25 0.25
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 25 0.25
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 25 0.25
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 25 0.25
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 25 0.25
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 0.57
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 1.7
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 2.3
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 3.0
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 21 7.0
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 21 7.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 7.0
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 7.0
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 20 9.3
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 20 9.3
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 20 9.3
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.25
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 394 IMSSMPSYRDISIGSHTRNNNNNHFEYVKLDF*VNVIK 281
I+SS+ + + S + NNNNN+ Y KL + +N I+
Sbjct: 81 IVSSLSNNYNYS-NYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 25.4 bits (53), Expect = 0.25
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 394 IMSSMPSYRDISIGSHTRNNNNNHFEYVKLDF*VNVIK 281
I+SS+ + + S + NNNNN+ Y KL + +N I+
Sbjct: 81 IISSLSNNYNYS-NYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.25
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 394 IMSSMPSYRDISIGSHTRNNNNNHFEYVKLDF*VNVIK 281
I+SS+ + + S + NNNNN+ Y KL + +N I+
Sbjct: 81 IISSLSNNYNYS-NYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.25
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 394 IMSSMPSYRDISIGSHTRNNNNNHFEYVKLDF*VNVIK 281
I+SS+ + + S + NNNNN+ Y KL + +N I+
Sbjct: 81 IISSLSNNYNYS-NYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.25
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 394 IMSSMPSYRDISIGSHTRNNNNNHFEYVKLDF*VNVIK 281
I+SS+ + + S + NNNNN+ Y KL + +N I+
Sbjct: 81 IISSLSNNYNYS-NYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.25
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 394 IMSSMPSYRDISIGSHTRNNNNNHFEYVKLDF*VNVIK 281
I+SS+ + + S + NNNNN+ Y KL + +N I+
Sbjct: 81 IISSLSNNYNYS-NYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.25
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 394 IMSSMPSYRDISIGSHTRNNNNNHFEYVKLDF*VNVIK 281
I+SS+ + + S + NNNNN+ Y KL + +N I+
Sbjct: 81 IISSLSNNYNYS-NYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.25
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 394 IMSSMPSYRDISIGSHTRNNNNNHFEYVKLDF*VNVIK 281
I+SS+ + + S + NNNNN+ Y KL + +N I+
Sbjct: 81 IISSLSNNYNYS-NYNNYNNNNNYNNYKKLYYNINYIE 117
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.2 bits (50), Expect = 0.57
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 120 YFKYISRNDQHSNTYITYKYTVLNKSYVI*I*ESIKSP 233
Y Y + N+ ++N Y Y + K+Y+I I E I P
Sbjct: 324 YSNYNNYNNYNNNNYNNYNKKLYYKNYIINI-EQIPVP 360
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.6 bits (46), Expect = 1.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 260 SMDGYLEKVWTFYRLSYLNHVR 195
SMD Y + W RLS+L ++
Sbjct: 84 SMDCYFRQSWRDSRLSFLGPIK 105
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 2.3
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -1
Query: 397 LIMSSMPSYRDISIGSHTRNNNNNHFEYVKLD 302
+I S PSY S G R NN + V D
Sbjct: 1 MIAVSGPSYEAFSYGGQARFNNQTVVDKVPPD 32
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 3.0
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1
Query: 310 LRIRNDCYYC 339
++I DCYYC
Sbjct: 317 IKILGDCYYC 326
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 20.6 bits (41), Expect = 7.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 263 PLFYSIFDNIYLKIQLYVFEMIVIIVSSMRADT 361
PL YS+ + L IQL V ++ ++++M T
Sbjct: 9 PLLYSVAMSQRLCIQLVVGPYVIGLMNTMTHTT 41
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 20.6 bits (41), Expect = 7.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 263 PLFYSIFDNIYLKIQLYVFEMIVIIVSSMRADT 361
PL YS+ + L IQL V ++ ++++M T
Sbjct: 8 PLLYSVAMSQRLCIQLVVGPYVIGLMNTMTHTT 40
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 361 SIGSHTRNNNNNHFEYVK 308
S+ + T +NNNN+ Y K
Sbjct: 317 SLSNKTIHNNNNYKNYNK 334
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.6 bits (41), Expect = 7.0
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 239 FPNIRPYFPL 268
FP++RP+ PL
Sbjct: 877 FPSVRPFAPL 886
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 20.2 bits (40), Expect = 9.3
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 313 RIRNDCYYCF*YASRYLYLDKTALSSLLT 399
R+RN Y CF A L D S +T
Sbjct: 40 RLRNQYYDCFIDAGSCLTPDSVFFKSHIT 68
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 135 SRNDQHSNTYITYKYTVLNKSYV 203
+ N+ ++N Y YK N +Y+
Sbjct: 92 NNNNYNNNNYNNYKKLYYNINYI 114
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 20.2 bits (40), Expect = 9.3
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 313 RIRNDCYYCF*YASRYLYLDKTALSSLLT 399
R+RN Y CF A L D S +T
Sbjct: 40 RLRNQYYDCFIDAGSCLTPDSVFFKSHIT 68
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,845
Number of Sequences: 438
Number of extensions: 2387
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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