Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C19
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   4.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.9  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 93  CYSCSYFCHVLFLTDKVSANGRALTILV 10
           CY C Y     +  D +  +G   +I+V
Sbjct: 73  CYDCPYNTQDCYREDCIPGDGNKRSIIV 100


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/45 (17%), Positives = 24/45 (53%)
 Frame = +1

Query: 280 STVLGAPRSCHKIVTDTGSVVRTCLDVNPADLNHTCRLMEKNSKV 414
           +T++G  ++C  ++ +   +   C +V+   + +  RLM +  ++
Sbjct: 249 TTLIGLIKNCVIVIFELYYLSHVCQNVSTEVIGNILRLMHRRFEI 293


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 385 CRLMEKNSKVKYCSVCDKDSC 447
           C+L  K  KVK   + D+  C
Sbjct: 97  CKLKNKERKVKPLLITDEPLC 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,650
Number of Sequences: 336
Number of extensions: 2567
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)