Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_C19
(489 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78239-2|CAI79140.1| 189|Caenorhabditis elegans Hypothetical pr... 32 0.19
Z81125-2|CAD56600.1| 507|Caenorhabditis elegans Hypothetical pr... 30 0.78
Z81125-1|CAB03382.1| 501|Caenorhabditis elegans Hypothetical pr... 30 0.78
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 30 1.0
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 30 1.0
U88168-7|AAC24396.2| 132|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 29 1.8
U55373-13|AAC25891.1| 151|Caenorhabditis elegans Hypothetical p... 29 1.8
Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z48783-1|CAA88701.1| 780|Caenorhabditis elegans Hypothetical pr... 28 3.2
AF233652-1|AAF63475.1| 780|Caenorhabditis elegans RFX-type tran... 28 3.2
U88168-6|AAC24401.1| 127|Caenorhabditis elegans Hypothetical pr... 28 4.2
U88167-7|AAB42229.1| 378|Caenorhabditis elegans Hypothetical pr... 28 4.2
U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protea... 28 4.2
U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protea... 28 4.2
AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical... 28 4.2
AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical... 28 4.2
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 27 7.3
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 27 7.3
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 27 7.3
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 27 7.3
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 9.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 9.7
AC024826-15|AAF60790.1| 354|Caenorhabditis elegans Hypothetical... 27 9.7
>Z78239-2|CAI79140.1| 189|Caenorhabditis elegans Hypothetical
protein C30G7.2 protein.
Length = 189
Score = 32.3 bits (70), Expect = 0.19
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 85 AITLAFLLAVFEIGTCLRCYQCNS--QQDPGCGDPFKSTKYLV--DCGTQDAINYN 240
A+ L LAV E + + C+ C+S ++ GC DPF ST L D NYN
Sbjct: 27 AVFLVLSLAVMEGVSGIGCFVCSSFDGENKGCEDPFNSTMDLSSRDRDASAVANYN 82
>Z81125-2|CAD56600.1| 507|Caenorhabditis elegans Hypothetical
protein T22A3.4b protein.
Length = 507
Score = 30.3 bits (65), Expect = 0.78
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 271 EIFSTVLGAPRSCHKIVTDTGSVVRTCLDVNPADLNHTCR 390
E F A + H I T+ G+ V LD+ + NH+CR
Sbjct: 173 EFFDVFCKATINSHSIHTNAGNEVGMALDLGVSKYNHSCR 212
>Z81125-1|CAB03382.1| 501|Caenorhabditis elegans Hypothetical
protein T22A3.4a protein.
Length = 501
Score = 30.3 bits (65), Expect = 0.78
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 271 EIFSTVLGAPRSCHKIVTDTGSVVRTCLDVNPADLNHTCR 390
E F A + H I T+ G+ V LD+ + NH+CR
Sbjct: 173 EFFDVFCKATINSHSIHTNAGNEVGMALDLGVSKYNHSCR 212
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 376 NHTCRLMEKNSKVKYCSVCDKDSCN 450
NH CRL ++ S YC +K SCN
Sbjct: 1243 NHDCRL-KRTSPTAYCDCWEKSSCN 1266
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 376 NHTCRLMEKNSKVKYCSVCDKDSCN 450
NH CRL ++ S YC +K SCN
Sbjct: 1243 NHDCRL-KRTSPTAYCDCWEKSSCN 1266
>U88168-7|AAC24396.2| 132|Caenorhabditis elegans Hypothetical
protein K11H12.6 protein.
Length = 132
Score = 29.9 bits (64), Expect = 1.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 112 VFEIGTCLRCYQCNSQQDPGCGDPFKS 192
+F + L CY CNS++ P C D +++
Sbjct: 10 LFAVSAPLNCYICNSKKQPDCIDNYQA 36
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 400 KNSKVKYCSVCDKDSC 447
KN K C CDKDSC
Sbjct: 20 KNQKTTLCGTCDKDSC 35
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 400 KNSKVKYCSVCDKDSC 447
KN K C CDKDSC
Sbjct: 20 KNQKTTLCGTCDKDSC 35
>U55373-13|AAC25891.1| 151|Caenorhabditis elegans Hypothetical
protein F26F12.4 protein.
Length = 151
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
Frame = +1
Query: 88 ITLAFLLAVFEIGTCLR--CYQ 147
+ LAF+L VF +GTCL CYQ
Sbjct: 90 VLLAFVLLVFVVGTCLMICCYQ 111
>Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical
protein F52B11.3 protein.
Length = 741
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 349 CLDVNPADLNHTCRLMEKNSKVKYCSVCDKDSCNGA 456
CL LN CR +E N K K C V D+D+ + A
Sbjct: 244 CLQKCLDSLNTFCRSVEFNPKEKNCIVSDEDTFSRA 279
>Z48783-1|CAA88701.1| 780|Caenorhabditis elegans Hypothetical
protein F33H1.1a protein.
Length = 780
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 142 YQCNSQQDPGCGDPFKSTKYLVDC--GTQDAINYNQLYLREVLTP 270
+QC++ D GD + ++ D GT++ +YNQ+ +TP
Sbjct: 129 FQCSNLNDGTVGDEMEVIQHSTDDPNGTREEFDYNQIEYGNAVTP 173
>AF233652-1|AAF63475.1| 780|Caenorhabditis elegans RFX-type
transcription factor DAF-19 short variant protein.
Length = 780
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 142 YQCNSQQDPGCGDPFKSTKYLVDC--GTQDAINYNQLYLREVLTP 270
+QC++ D GD + ++ D GT++ +YNQ+ +TP
Sbjct: 129 FQCSNLNDGTVGDEMEVIQHSTDDPNGTREEFDYNQIEYGNAVTP 173
>U88168-6|AAC24401.1| 127|Caenorhabditis elegans Hypothetical
protein K11H12.7 protein.
Length = 127
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 94 LAFLLAVFEIGTCLRCYQCNSQQDPGC 174
L ++F + L CY CNS P C
Sbjct: 4 LIVFASLFAVSAALNCYICNSLNQPEC 30
>U88167-7|AAB42229.1| 378|Caenorhabditis elegans Hypothetical
protein D2092.2 protein.
Length = 378
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 275 SSAPSWEPLDLVTRSSPIPDQSCA 346
SS+PS EPLD+ +S P P S A
Sbjct: 259 SSSPSEEPLDMSQKSMPAPRVSTA 282
>U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protease
protein 2, isoformb protein.
Length = 429
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +1
Query: 289 LGAPRSCHKIVTDTGSVVRTCLDVNPADLNHTCRLMEKNSKVKYCSVCDKDSCNGAG 459
+G P+ K++ DTGS D+ C + + CD +C GAG
Sbjct: 80 IGTPQQQFKVILDTGSSNLWIPDITCGTKPENCSTVPACRGIICQFECDDQACCGAG 136
>U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protease
protein 2, isoforma protein.
Length = 635
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +1
Query: 289 LGAPRSCHKIVTDTGSVVRTCLDVNPADLNHTCRLMEKNSKVKYCSVCDKDSCNGAG 459
+G P+ K++ DTGS D+ C + + CD +C GAG
Sbjct: 286 IGTPQQQFKVILDTGSSNLWIPDITCGTKPENCSTVPACRGIICQFECDDQACCGAG 342
>AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical
protein Y54G2A.26b protein.
Length = 549
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = +1
Query: 265 TPEIFSTVLGAPRSCHKIVTDTGSVVRTCLDVNPADLNHTCRLMEKNSKVKYCSVCDKDS 444
T +I L R C + D V C D N +L + R + K +V + +
Sbjct: 220 TSQIMGISLATVRKCIDMAVDE-EVFTRCTDKNLVNLTPSERAEREELLSKLSTVFEDEK 278
Query: 445 CNGAGTTSVSI 477
GAGT ++I
Sbjct: 279 SLGAGTAGMTI 289
>AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical
protein Y54G2A.26a protein.
Length = 611
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = +1
Query: 265 TPEIFSTVLGAPRSCHKIVTDTGSVVRTCLDVNPADLNHTCRLMEKNSKVKYCSVCDKDS 444
T +I L R C + D V C D N +L + R + K +V + +
Sbjct: 282 TSQIMGISLATVRKCIDMAVDE-EVFTRCTDKNLVNLTPSERAEREELLSKLSTVFEDEK 340
Query: 445 CNGAGTTSVSI 477
GAGT ++I
Sbjct: 341 SLGAGTAGMTI 351
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 301 RSCHKIVTDTGSVVRTCLDVNPADLNHTCRLMEKNSKVK 417
RS H +VTD G +V TC + + + + K++ K
Sbjct: 180 RSKHNLVTDKGGMVATCSSTSVSSMTGELKRKRKHTVPK 218
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 301 RSCHKIVTDTGSVVRTCLDVNPADLNHTCRLMEKNSKVK 417
RS H +VTD G +V TC + + + + K++ K
Sbjct: 180 RSKHNLVTDKGGMVATCSSTSVSSMTGELKRKRKHTVPK 218
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 301 RSCHKIVTDTGSVVRTCLDVNPADLNHTCRLMEKNSKVK 417
RS H +VTD G +V TC + + + + K++ K
Sbjct: 180 RSKHNLVTDKGGMVATCSSTSVSSMTGELKRKRKHTVPK 218
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 301 RSCHKIVTDTGSVVRTCLDVNPADLNHTCRLMEKNSKVK 417
RS H +VTD G +V TC + + + + K++ K
Sbjct: 84 RSKHNLVTDKGGMVATCSSTSVSSMTGELKRKRKHTVPK 122
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 343 RTCLDVNPADLNHTCRLMEKNSKVKYCSVCDKDSCNGAGTTSVS 474
+ C+D++ N+TC + N+K Y C +D N S++
Sbjct: 4128 KECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDYENNVVVGSMT 4171
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 343 RTCLDVNPADLNHTCRLMEKNSKVKYCSVCDKDSCNGAGTTSVS 474
+ C+D++ N+TC + N+K Y C +D N S++
Sbjct: 4128 KECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDYENNVVVGSMT 4171
>AC024826-15|AAF60790.1| 354|Caenorhabditis elegans Hypothetical
protein Y55F3AM.13 protein.
Length = 354
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 115 FEIGTCLRCYQCNSQQDPGCGDPFKSTKYLVDCGTQDAINYNQLYLREVL 264
FE+ + CY S +P G S V+ + A+ + QL L E L
Sbjct: 14 FEVHPKIACYPVGSYHNPSFGGVGPSDAVQVESDPRKALEHKQLSLIEQL 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,432,149
Number of Sequences: 27780
Number of extensions: 246341
Number of successful extensions: 677
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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