Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C19
         (489 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   3.1  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   5.3  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   5.3  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   5.3  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   5.3  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   5.3  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   5.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.3  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = +1

Query: 310 HKIVTDTGSVVRTCLDVNPADLNHTCRLMEKNSKVKYC 423
           HKI    G+ +  C      D++   R++++ +K+++C
Sbjct: 461 HKIRVPPGTPIYECNKRCNCDIDCINRVVQRGTKMQFC 498


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 235 YNQLYLREVLTPEIFSTVLGAP 300
           YN  + R  +TPE++S  L  P
Sbjct: 242 YNTKFFRYRITPELYSEHLVVP 263


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 33  RLLRLYPSKIKHGKNNYSYN 92
           +++    +K  H  NNY YN
Sbjct: 80  KIISSLSNKTIHNNNNYKYN 99


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 33  RLLRLYPSKIKHGKNNYSYN 92
           +++    +K  H  NNY YN
Sbjct: 80  KIISSLSNKTIHNNNNYKYN 99


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 33  RLLRLYPSKIKHGKNNYSYN 92
           +++    +K  H  NNY YN
Sbjct: 80  KIISSLSNKTIHNNNNYKYN 99


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 33  RLLRLYPSKIKHGKNNYSYN 92
           +++    +K  H  NNY YN
Sbjct: 80  KIISSLSNKTIHNNNNYKYN 99


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 33  RLLRLYPSKIKHGKNNYSYN 92
           +++    +K  H  NNY YN
Sbjct: 80  KIISSLSNKTIHNNNNYKYN 99


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 33  RLLRLYPSKIKHGKNNYSYN 92
           +++    +K  H  NNY YN
Sbjct: 313 KIISSLSNKTIHNNNNYKYN 332


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 172 ILDLVENYTGNSVNRYQFQI 113
           ILDLV N+T +    +Q  I
Sbjct: 115 ILDLVPNHTSDQHKWFQMSI 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,754
Number of Sequences: 438
Number of extensions: 3279
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)