Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C18
         (348 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   0.68 
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   2.7  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   3.6  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   3.6  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   3.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   3.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   3.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    20   8.3  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    20   8.3  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 0.68
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +3

Query: 126 PDPSTFFDTIGPEPNL--GPIKSGITSP 203
           P P T F+T G  P+L     KSG T P
Sbjct: 154 PPPITSFETSGLRPHLLENVKKSGYTKP 181


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 74  KCCPNR*WVYTATSYKFTRSVNIFRYNRTGT 166
           K  P R ++    + +FT+S N+  + RT T
Sbjct: 73  KLKPKRQFICKYCNRQFTKSYNLLIHERTHT 103


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -2

Query: 302 FIIWYPSISSSVCFFINWLV 243
           F++   S  + VC+F +W +
Sbjct: 14  FMVLSASAGNVVCYFASWTI 33


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -2

Query: 302 FIIWYPSISSSVCFFINWLV 243
           F++   S  + VC+F +W +
Sbjct: 14  FMVLSASAGNVVCYFASWTI 33


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +1

Query: 85  QPLVGLHRYQLQVYQIRQHFSIQSD 159
           +P+V L   + Q+Y +R+   + +D
Sbjct: 173 RPMVSLQVIKAQIYSLRETVDVFND 197


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +1

Query: 85  QPLVGLHRYQLQVYQIRQHFSIQSD 159
           +P+V L   + Q+Y +R+   + +D
Sbjct: 173 RPMVSLQVIKAQIYSLRETVDVFND 197


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +1

Query: 85  QPLVGLHRYQLQVYQIRQHFSIQSD 159
           +P+V L   + Q+Y +R+   + +D
Sbjct: 493 RPMVSLQVIKAQIYSLRETVDVFND 517


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -2

Query: 269 VCFFINWLV 243
           VC+F NW +
Sbjct: 25  VCYFSNWAI 33


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 208 NPGLVIPLLMGPKLG 164
           +P ++IPL   PK+G
Sbjct: 11  SPIILIPLFRWPKIG 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,744
Number of Sequences: 336
Number of extensions: 1756
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)