Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C18
         (348 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017475-1|AAH17475.2|  469|Homo sapiens TTC15 protein protein.        31   0.75 
BC014164-1|AAH14164.2|  735|Homo sapiens tetratricopeptide repea...    31   0.75 
AK094181-1|BAC04301.1|  696|Homo sapiens (EC 3.1.4.17).  protein.      31   0.75 
AC073502-2|AAY24194.1|  349|Homo sapiens unknown protein.              31   0.75 
BC150256-1|AAI50257.1| 1360|Homo sapiens TRAF2 and NCK interacti...    31   1.3  
AF172271-1|AAF03789.1| 1268|Homo sapiens Traf2 and NCK interacti...    31   1.3  
AF172270-1|AAF03788.1| 1297|Homo sapiens Traf2 and NCK interacti...    31   1.3  
AF172269-1|AAF03787.1| 1323|Homo sapiens Traf2 and NCK interacti...    31   1.3  
AF172268-1|AAF03786.1| 1276|Homo sapiens Traf2 and NCK interacti...    31   1.3  
AF172267-1|AAF03785.1| 1352|Homo sapiens Traf2 and NCK interacti...    31   1.3  
AF172266-1|AAF03784.1| 1305|Homo sapiens Traf2 and NCK interacti...    31   1.3  
AF172265-1|AAF03783.1| 1331|Homo sapiens Traf2 and NCK interacti...    31   1.3  
AF172264-1|AAF03782.1| 1360|Homo sapiens Traf2 and NCK interacti...    31   1.3  
AB011123-1|BAA25477.2| 1385|Homo sapiens KIAA0551 protein protein.     31   1.3  
BC052950-1|AAH52950.1| 1008|Homo sapiens G protein regulated ind...    29   5.3  
AL834165-1|CAD38868.1|  707|Homo sapiens hypothetical protein pr...    29   5.3  
AB067480-1|BAB67786.1|  800|Homo sapiens KIAA1893 protein protein.     29   5.3  
D83760-1|BAA21128.1|  467|Homo sapiens mother against dpp (Mad) ...    28   9.3  
BC104762-1|AAI04763.1|  467|Homo sapiens SMAD9 protein protein.        28   9.3  
BC104760-1|AAI04761.1|  467|Homo sapiens SMAD9 protein protein.        28   9.3  
AL138706-3|CAI14007.1|  467|Homo sapiens SMAD family member 9 pr...    28   9.3  

>BC017475-1|AAH17475.2|  469|Homo sapiens TTC15 protein protein.
          Length = 469

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 261 EADRRRDAWIPNDETKKILLEAQSSPKGS 347
           E DRR DAW+P + T+ +L    +  +G+
Sbjct: 36  EMDRRNDAWLPGEATRGVLRAVATQQRGA 64


>BC014164-1|AAH14164.2|  735|Homo sapiens tetratricopeptide repeat
           domain 15 protein.
          Length = 735

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 261 EADRRRDAWIPNDETKKILLEAQSSPKGS 347
           E DRR DAW+P + T+ +L    +  +G+
Sbjct: 302 EMDRRNDAWLPGEATRGVLRAVATQQRGA 330


>AK094181-1|BAC04301.1|  696|Homo sapiens (EC 3.1.4.17).  protein.
          Length = 696

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 261 EADRRRDAWIPNDETKKILLEAQSSPKGS 347
           E DRR DAW+P + T+ +L    +  +G+
Sbjct: 285 EMDRRNDAWLPGEATRGVLRAVATQQRGA 313


>AC073502-2|AAY24194.1|  349|Homo sapiens unknown protein.
          Length = 349

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 261 EADRRRDAWIPNDETKKILLEAQSSPKGS 347
           E DRR DAW+P + T+ +L    +  +G+
Sbjct: 302 EMDRRNDAWLPGEATRGVLRAVATQQRGA 330


>BC150256-1|AAI50257.1| 1360|Homo sapiens TRAF2 and NCK interacting
           kinase protein.
          Length = 1360

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 235 VSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVD 134
           +SP++A  N+PG    L  GP+LGS PI + N D
Sbjct: 679 ISPALARKNSPGNGSAL--GPRLGSQPIRASNPD 710


>AF172271-1|AAF03789.1| 1268|Homo sapiens Traf2 and NCK interacting
           kinase, splice variant 8 protein.
          Length = 1268

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 235 VSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVD 134
           +SP++A  N+PG    L  GP+LGS PI + N D
Sbjct: 595 ISPALARKNSPGNGSAL--GPRLGSQPIRASNPD 626


>AF172270-1|AAF03788.1| 1297|Homo sapiens Traf2 and NCK interacting
           kinase, splice variant 7 protein.
          Length = 1297

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 235 VSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVD 134
           +SP++A  N+PG    L  GP+LGS PI + N D
Sbjct: 624 ISPALARKNSPGNGSAL--GPRLGSQPIRASNPD 655


>AF172269-1|AAF03787.1| 1323|Homo sapiens Traf2 and NCK interacting
           kinase, splice variant 6 protein.
          Length = 1323

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 235 VSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVD 134
           +SP++A  N+PG    L  GP+LGS PI + N D
Sbjct: 650 ISPALARKNSPGNGSAL--GPRLGSQPIRASNPD 681


>AF172268-1|AAF03786.1| 1276|Homo sapiens Traf2 and NCK interacting
           kinase, splice variant 5 protein.
          Length = 1276

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 235 VSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVD 134
           +SP++A  N+PG    L  GP+LGS PI + N D
Sbjct: 595 ISPALARKNSPGNGSAL--GPRLGSQPIRASNPD 626


>AF172267-1|AAF03785.1| 1352|Homo sapiens Traf2 and NCK interacting
           kinase, splice variant 4 protein.
          Length = 1352

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 235 VSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVD 134
           +SP++A  N+PG    L  GP+LGS PI + N D
Sbjct: 679 ISPALARKNSPGNGSAL--GPRLGSQPIRASNPD 710


>AF172266-1|AAF03784.1| 1305|Homo sapiens Traf2 and NCK interacting
           kinase, splice variant 3 protein.
          Length = 1305

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 235 VSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVD 134
           +SP++A  N+PG    L  GP+LGS PI + N D
Sbjct: 624 ISPALARKNSPGNGSAL--GPRLGSQPIRASNPD 655


>AF172265-1|AAF03783.1| 1331|Homo sapiens Traf2 and NCK interacting
           kinase, splice variant 2 protein.
          Length = 1331

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 235 VSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVD 134
           +SP++A  N+PG    L  GP+LGS PI + N D
Sbjct: 650 ISPALARKNSPGNGSAL--GPRLGSQPIRASNPD 681


>AF172264-1|AAF03782.1| 1360|Homo sapiens Traf2 and NCK interacting
           kinase, splice variant 1 protein.
          Length = 1360

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 235 VSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVD 134
           +SP++A  N+PG    L  GP+LGS PI + N D
Sbjct: 679 ISPALARKNSPGNGSAL--GPRLGSQPIRASNPD 710


>AB011123-1|BAA25477.2| 1385|Homo sapiens KIAA0551 protein protein.
          Length = 1385

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 235 VSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVD 134
           +SP++A  N+PG    L  GP+LGS PI + N D
Sbjct: 704 ISPALARKNSPGNGSAL--GPRLGSQPIRASNPD 735


>BC052950-1|AAH52950.1| 1008|Homo sapiens G protein regulated
           inducer of neurite outgrowth 1 protein.
          Length = 1008

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +3

Query: 126 PDPSTFFDTIGPEPNLGPIKSGITSPGLLSEAMEGLTIKNQPV 254
           P PS   D + P  ++    +G T PGLL + + G + KN PV
Sbjct: 291 PGPSGKADPV-PLESMDSASTGKTEPGLLGKLIPGSSGKNGPV 332


>AL834165-1|CAD38868.1|  707|Homo sapiens hypothetical protein
           protein.
          Length = 707

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +3

Query: 126 PDPSTFFDTIGPEPNLGPIKSGITSPGLLSEAMEGLTIKNQPV 254
           P PS   D + P  ++    +G T PGLL + + G + KN PV
Sbjct: 101 PGPSGKADPV-PLESMDSASTGKTEPGLLGKLIPGSSGKNGPV 142


>AB067480-1|BAB67786.1|  800|Homo sapiens KIAA1893 protein protein.
          Length = 800

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +3

Query: 126 PDPSTFFDTIGPEPNLGPIKSGITSPGLLSEAMEGLTIKNQPV 254
           P PS   D + P  ++    +G T PGLL + + G + KN PV
Sbjct: 293 PGPSGKADPV-PLESMDSASTGKTEPGLLGKLIPGSSGKNGPV 334


>D83760-1|BAA21128.1|  467|Homo sapiens mother against dpp (Mad)
           related protein protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 162 EPNLGPIKSGITSPGLLSEAMEGL-TIKNQPVDKEADRRRDAWIPNDETKKILLE 323
           EP   P +  + +P L   A E   T   QPVD  ADR     IPN + + +  E
Sbjct: 215 EPE-SPYQHSVDTPPLPYHATEASETQSGQPVDATADRHVVLSIPNGDFRPVCYE 268


>BC104762-1|AAI04763.1|  467|Homo sapiens SMAD9 protein protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 162 EPNLGPIKSGITSPGLLSEAMEGL-TIKNQPVDKEADRRRDAWIPNDETKKILLE 323
           EP   P +  + +P L   A E   T   QPVD  ADR     IPN + + +  E
Sbjct: 215 EPE-SPYQHSVDTPPLPYHATEASETQSGQPVDATADRHVVLSIPNGDFRPVCYE 268


>BC104760-1|AAI04761.1|  467|Homo sapiens SMAD9 protein protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 162 EPNLGPIKSGITSPGLLSEAMEGL-TIKNQPVDKEADRRRDAWIPNDETKKILLE 323
           EP   P +  + +P L   A E   T   QPVD  ADR     IPN + + +  E
Sbjct: 215 EPE-SPYQHSVDTPPLPYHATEASETQSGQPVDATADRHVVLSIPNGDFRPVCYE 268


>AL138706-3|CAI14007.1|  467|Homo sapiens SMAD family member 9
           protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 162 EPNLGPIKSGITSPGLLSEAMEGL-TIKNQPVDKEADRRRDAWIPNDETKKILLE 323
           EP   P +  + +P L   A E   T   QPVD  ADR     IPN + + +  E
Sbjct: 215 EPE-SPYQHSVDTPPLPYHATEASETQSGQPVDATADRHVVLSIPNGDFRPVCYE 268


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,806,915
Number of Sequences: 237096
Number of extensions: 1110726
Number of successful extensions: 2514
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2514
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)