Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C18
         (348 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein...    32   0.17 
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA...    32   0.17 
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB...    32   0.17 
X70644-1|CAA49989.1|  847|Drosophila melanogaster histidine deca...    27   6.5  
DQ138866-1|ABA86472.1| 1024|Drosophila melanogaster CG10719 prot...    27   6.5  
AY129441-1|AAM76183.1| 1095|Drosophila melanogaster LD16270p pro...    27   6.5  
AF195873-1|AAF13929.1| 1037|Drosophila melanogaster brain tumor ...    27   6.5  
AF195872-1|AAF13928.1| 1037|Drosophila melanogaster brain tumor ...    27   6.5  
AF195871-1|AAF13927.1|  790|Drosophila melanogaster brain tumor ...    27   6.5  
AF195870-1|AAF13926.1|  778|Drosophila melanogaster brain tumor ...    27   6.5  
AF119332-1|AAF03086.1| 1037|Drosophila melanogaster brain tumor ...    27   6.5  
AE014134-3055|AAS64719.1| 1037|Drosophila melanogaster CG10719-P...    27   6.5  
AE014134-3054|AAF53771.1| 1037|Drosophila melanogaster CG10719-P...    27   6.5  
AE014134-3053|AAN11027.1| 1037|Drosophila melanogaster CG10719-P...    27   6.5  
AE013599-1049|AAF58823.1|  847|Drosophila melanogaster CG3454-PA...    27   6.5  
AB022432-1|BAA82071.1| 1037|Drosophila melanogaster transcriptio...    27   6.5  

>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
            protein.
          Length = 2146

 Score = 32.3 bits (70), Expect = 0.17
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +3

Query: 108  LPATSLPDPSTFFDTIGPEPNLGPIKSGITSPGLLSEAMEGLTIKNQPVDKEADRRRD 281
            L  T L D    +   GP P    +    T PG++     G+ I++  V KEAD  RD
Sbjct: 1370 LSTTGLLDAQVLY-LGGPAPTRESLLGATTEPGIIPVPGAGIPIEDTTVPKEADDSRD 1426


>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
            isoform A protein.
          Length = 2146

 Score = 32.3 bits (70), Expect = 0.17
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +3

Query: 108  LPATSLPDPSTFFDTIGPEPNLGPIKSGITSPGLLSEAMEGLTIKNQPVDKEADRRRD 281
            L  T L D    +   GP P    +    T PG++     G+ I++  V KEAD  RD
Sbjct: 1370 LSTTGLLDAQVLY-LGGPAPTRESLLGATTEPGIIPVPGAGIPIEDTTVPKEADDSRD 1426


>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
            isoform B protein.
          Length = 2189

 Score = 32.3 bits (70), Expect = 0.17
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +3

Query: 108  LPATSLPDPSTFFDTIGPEPNLGPIKSGITSPGLLSEAMEGLTIKNQPVDKEADRRRD 281
            L  T L D    +   GP P    +    T PG++     G+ I++  V KEAD  RD
Sbjct: 1413 LSTTGLLDAQVLY-LGGPAPTRESLLGATTEPGIIPVPGAGIPIEDTTVPKEADDSRD 1469


>X70644-1|CAA49989.1|  847|Drosophila melanogaster histidine
           decarboxylase protein.
          Length = 847

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = -3

Query: 268 SASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGKLVAGSGVDPLT 89
           S+SLS G     +P ++SL+   LV PLL+     S P++S +  G G+   GS  D   
Sbjct: 781 SSSLSGGATPTPTP-MSSLDE--LVTPLLLSFASPSQPMLSAHGIGEGQRERGSDSDATV 837

Query: 88  VGTT 77
             TT
Sbjct: 838 CSTT 841


>DQ138866-1|ABA86472.1| 1024|Drosophila melanogaster CG10719
           protein.
          Length = 1024

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 301 SSFGIQASLRLSASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGK 122
           SS    ++  LS   ST   ++ + ++AS N PG++   L     G    +S  V G+GK
Sbjct: 91  SSSSSSSTSGLSGCGSTSSSVISANNVASSNGPGVIGSNLQSSNNGGNSGISSLVVGAGK 150


>AY129441-1|AAM76183.1| 1095|Drosophila melanogaster LD16270p
           protein.
          Length = 1095

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 301 SSFGIQASLRLSASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGK 122
           SS    ++  LS   ST   ++ + ++AS N PG++   L     G    +S  V G+GK
Sbjct: 156 SSSSSSSTSGLSGCGSTSSSVISANNVASSNGPGVIGSNLQSSNNGGNSGISSLVVGAGK 215


>AF195873-1|AAF13929.1| 1037|Drosophila melanogaster brain tumor
           protein.
          Length = 1037

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 301 SSFGIQASLRLSASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGK 122
           SS    ++  LS   ST   ++ + ++AS N PG++   L     G    +S  V G+GK
Sbjct: 98  SSSSSSSTSGLSGCGSTSSSVISANNVASSNGPGVIGSNLQSSNNGGNSGISSLVVGAGK 157


>AF195872-1|AAF13928.1| 1037|Drosophila melanogaster brain tumor
           protein.
          Length = 1037

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 301 SSFGIQASLRLSASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGK 122
           SS    ++  LS   ST   ++ + ++AS N PG++   L     G    +S  V G+GK
Sbjct: 98  SSSSSSSTSGLSGCGSTSSSVISANNVASSNGPGVIGSNLQSSNNGGNSGISSLVVGAGK 157


>AF195871-1|AAF13927.1|  790|Drosophila melanogaster brain tumor
           protein.
          Length = 790

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 301 SSFGIQASLRLSASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGK 122
           SS    ++  LS   ST   ++ + ++AS N PG++   L     G    +S  V G+GK
Sbjct: 98  SSSSSSSTSGLSGCGSTSSSVISANNVASSNGPGVIGSNLQSSNNGGNSGISSLVVGAGK 157


>AF195870-1|AAF13926.1|  778|Drosophila melanogaster brain tumor
           protein.
          Length = 778

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 301 SSFGIQASLRLSASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGK 122
           SS    ++  LS   ST   ++ + ++AS N PG++   L     G    +S  V G+GK
Sbjct: 98  SSSSSSSTSGLSGCGSTSSSVISANNVASSNGPGVIGSNLQSSNNGGNSGISSLVVGAGK 157


>AF119332-1|AAF03086.1| 1037|Drosophila melanogaster brain tumor
           protein.
          Length = 1037

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 301 SSFGIQASLRLSASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGK 122
           SS    ++  LS   ST   ++ + ++AS N PG++   L     G    +S  V G+GK
Sbjct: 98  SSSSSSSTSGLSGCGSTSSSVISANNVASSNGPGVIGSNLQSSNNGGNSGISSLVVGAGK 157


>AE014134-3055|AAS64719.1| 1037|Drosophila melanogaster CG10719-PC,
           isoform C protein.
          Length = 1037

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 301 SSFGIQASLRLSASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGK 122
           SS    ++  LS   ST   ++ + ++AS N PG++   L     G    +S  V G+GK
Sbjct: 98  SSSSSSSTSGLSGCGSTSSSVISANNVASSNGPGVIGSNLQSSNNGGNSGISSLVVGAGK 157


>AE014134-3054|AAF53771.1| 1037|Drosophila melanogaster CG10719-PB,
           isoform B protein.
          Length = 1037

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 301 SSFGIQASLRLSASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGK 122
           SS    ++  LS   ST   ++ + ++AS N PG++   L     G    +S  V G+GK
Sbjct: 98  SSSSSSSTSGLSGCGSTSSSVISANNVASSNGPGVIGSNLQSSNNGGNSGISSLVVGAGK 157


>AE014134-3053|AAN11027.1| 1037|Drosophila melanogaster CG10719-PA,
           isoform A protein.
          Length = 1037

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 301 SSFGIQASLRLSASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGK 122
           SS    ++  LS   ST   ++ + ++AS N PG++   L     G    +S  V G+GK
Sbjct: 98  SSSSSSSTSGLSGCGSTSSSVISANNVASSNGPGVIGSNLQSSNNGGNSGISSLVVGAGK 157


>AE013599-1049|AAF58823.1|  847|Drosophila melanogaster CG3454-PA
           protein.
          Length = 847

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = -3

Query: 268 SASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGKLVAGSGVDPLT 89
           S+SLS G     +P ++SL+   LV PLL+     S P++S +  G G+   GS  D   
Sbjct: 781 SSSLSGGATPTPTP-MSSLDE--LVTPLLLSFASPSQPMLSAHGIGEGQREQGSDSDATV 837

Query: 88  VGTT 77
             TT
Sbjct: 838 CSTT 841


>AB022432-1|BAA82071.1| 1037|Drosophila melanogaster transcription
           factor protein.
          Length = 1037

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 301 SSFGIQASLRLSASLSTGWFLMVSPSIASLNNPGLVIPLLMGPKLGSGPIVSKNVDGSGK 122
           SS    ++  LS   ST   ++ + ++AS N PG++   L     G    +S  V G+GK
Sbjct: 98  SSSSSSSTSGLSGCGSTSSSVISANNVASSNGPGVIGSNLQSSNNGGNSGISSLVVGAGK 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,524,542
Number of Sequences: 53049
Number of extensions: 331905
Number of successful extensions: 645
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)