Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C17
         (416 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   2.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   3.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   3.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   4.8  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.4  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +1

Query: 154 GLPKGVMLTHINALC 198
           G+P+GV+L  ++A+C
Sbjct: 446 GIPQGVVLNPLDAIC 460


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 346 NPQKYLNAIQEY 381
           NP K+L AI+EY
Sbjct: 158 NPVKFLRAIEEY 169


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 131 YCSRLELRDYLR 166
           YCSR +L+ YLR
Sbjct: 534 YCSRGDLQTYLR 545


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 67  VETDVRSYEPAEVQGWTDTVFI-LFSSGTTGLPKGVM 174
           +ET V+      V+GWTD   +   S   + LPK ++
Sbjct: 216 LETLVQETNRTSVEGWTDVSNVKRKSKEISKLPKSML 252


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 67  VETDVRSYEPAEVQGWTDTVFI-LFSSGTTGLPKGVM 174
           +ET V+      V+GWTD   +   S   + LPK ++
Sbjct: 216 LETLVQETNRTSVEGWTDVSNVKRKSKEISKLPKSML 252


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 280 YGLISTINYILIKKTIVYFSGFNPQK 357
           +GL   +  +   +   YF+G NP+K
Sbjct: 101 FGLGHPLESVPFPQVYSYFAGVNPRK 126


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 107 KDGQTQCSYCSRLELRDYLRE*C 175
           K+   QC Y +  E+  Y+R  C
Sbjct: 218 KNAVYQCKYGNNCEIDMYMRRKC 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,331
Number of Sequences: 336
Number of extensions: 2068
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)