Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C16
         (391 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   1.9  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   2.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   2.5  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   3.3  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   3.3  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   3.3  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   3.3  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   3.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   4.3  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    20   7.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   7.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   10.0 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   10.0 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   10.0 
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         20   10.0 

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 133 WDPEAKAEYPRSNKLVI 183
           W P  KAE P SN + I
Sbjct: 95  WVPGGKAEVPPSNPIYI 111


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +2

Query: 101 SPCQ--SHISQKHGTQRLKQNIHAVISWLSV 187
           +PC   S  SQ  GTQ  +Q  H    W+++
Sbjct: 181 NPCSINSTSSQPVGTQIHQQTNHTFYPWMAI 211


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = +2

Query: 35  VNVSQNLNKLVKSP*RTNTFTVSPCQSHISQKHGTQRLKQNIHAVISWLSVKHYLV 202
           +N S N  K ++   +   F V      +   +  QR +  IH  + ++ V  YL+
Sbjct: 93  INTSINGTKFIEFINKLIEFDVKLQNVSLIINYENQRTRSRIHLFVRYVFVTSYLL 148


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -3

Query: 110 DRVTP*KYSYVMAISLIY 57
           DRV P  +SY +++++++
Sbjct: 116 DRVNPYLFSYALSVAILH 133


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 274 PVAVLKAGETRHARLDFEF 330
           P+A++K+G+  H  + F +
Sbjct: 287 PIAIIKSGDYNHVPMIFGY 305


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 274 PVAVLKAGETRHARLDFEF 330
           P+A++K+G+  H  + F +
Sbjct: 287 PIAIIKSGDYNHVPMIFGY 305


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 274 PVAVLKAGETRHARLDFEF 330
           P+A++K+G+  H  + F +
Sbjct: 289 PIAIIKSGDYNHVPMIFGY 307


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +2

Query: 35  VNVSQNLNKLVKSP*RTNTFTVSPCQSHI 121
           + + +++++L KSP   N +  SP  SH+
Sbjct: 86  IMMRRDMSRLEKSPLLANGYNHSPHLSHM 114


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +2

Query: 80  RTNTFTVSPCQSHISQKHGTQRLKQNIHAV 169
           +TN F  S C  + + +H      +  H+V
Sbjct: 20  KTNPFLASDCDKNQNTEHNYTHNNEMYHSV 49


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 274 PVAVLKAGETRHARLDFEF 330
           P+A +K+G+  H  + F +
Sbjct: 289 PIATIKSGDYNHVPMIFGY 307


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 265 PTPVMTLSPPE 233
           PTP+M+ +PP+
Sbjct: 317 PTPMMSPAPPQ 327


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 34  RERVAKSQ*ISEIAMTYEYFYGVTLSESHQSET 132
           +E  A+ + I+EIA  Y+Y   +   +  ++ET
Sbjct: 227 KEYRARRKEIAEIAFAYKYGDPIPYIQYTETET 259


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +3

Query: 237 GGDNVITGVGKNTSRSIESRRDKTCTL 317
           GG    +GVG+   + ++ R   T  L
Sbjct: 70  GGPRFSSGVGRKAWKHLDFRNSATAEL 96


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +3

Query: 237 GGDNVITGVGKNTSRSIESRRDKTCTL 317
           GG    +GVG+   + ++ R   T  L
Sbjct: 70  GGPRFSSGVGRKAWKHLDFRNSATAEL 96


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 259 ESVKIPVAVLKAGETRH 309
           E +KIP A +  G+T++
Sbjct: 176 EELKIPKAKINTGKTQY 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,078
Number of Sequences: 336
Number of extensions: 1565
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)