Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_C16
(391 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 2.9
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 3.8
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 3.8
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 3.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 6.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 6.6
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 20 8.7
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 20 8.7
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 20 8.7
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 20 8.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 20 8.7
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.8 bits (44), Expect = 2.9
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 347 MTGASGNSKSKRACLVSPAFNTATG--IFTDSCNDIV 243
+TG GN + + +PA TAT +F+ + +D++
Sbjct: 52 VTGIFGNITTCTVIIKNPAMQTATNYYLFSLAISDLI 88
Score = 20.6 bits (41), Expect = 6.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 84 RILLRCHPVRVTSVRNM 134
R L CHP+RV ++ +
Sbjct: 139 RYLAICHPLRVYTISGL 155
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.4 bits (43), Expect = 3.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 208 RPDQVVLDG*PAYYCVDILL*PLGPMFLTDVT 113
RPD G PA VDI++ +GP+ D+T
Sbjct: 22 RPD---FGGPPATVEVDIMVRSMGPISEVDMT 50
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.4 bits (43), Expect = 3.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 358 IQGSGPVHLIG 390
I GSG VHL+G
Sbjct: 181 IAGSGAVHLVG 191
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +2
Query: 38 NVSQNLNKLVKSP 76
N++Q L+KL++SP
Sbjct: 887 NLTQTLDKLIRSP 899
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 6.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 234 SGGDNVITGVGKNTSRSI 287
+G +ITGVGK TS ++
Sbjct: 822 TGKVEMITGVGKATSPNL 839
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 318 QACMSCLSCFQY 283
Q C C +C QY
Sbjct: 604 QCCWHCFNCTQY 615
Score = 20.2 bits (40), Expect = 8.7
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 140 GSHVSD*CDSD 108
G+H+ D CD+D
Sbjct: 168 GAHILDDCDND 178
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = -3
Query: 329 NSKSKRACLVSPAFNTATGIFTDSCND 249
N CL +P N+ + + + +C D
Sbjct: 40 NGHCSHLCLPAPRINSKSPLLSCACPD 66
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = -3
Query: 329 NSKSKRACLVSPAFNTATGIFTDSCND 249
N CL +P N+ + + + +C D
Sbjct: 40 NGHCSHLCLPAPRINSKSPLLSCACPD 66
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.2 bits (40), Expect = 8.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 97 GVTLSESHQSETWD 138
GV LSE + S WD
Sbjct: 198 GVDLSEFYMSVEWD 211
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.2 bits (40), Expect = 8.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 97 GVTLSESHQSETWD 138
GV LSE + S WD
Sbjct: 198 GVDLSEFYMSVEWD 211
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 264 GKNTSRSIESRRD 302
GK+T+ S+E +RD
Sbjct: 130 GKSTTTSVEVKRD 142
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,744
Number of Sequences: 438
Number of extensions: 1976
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9514659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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