Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_C15
(354 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 25 0.35
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 25 0.35
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 1.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 1.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 1.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 1.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 1.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 1.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 1.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 1.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 1.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 2.5
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 5.7
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 5.7
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 5.7
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 5.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 5.7
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 5.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 5.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 5.7
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 5.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 7.5
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 20 9.9
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 20 9.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 20 9.9
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 20 9.9
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 24.6 bits (51), Expect = 0.35
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -1
Query: 309 VIHRKFALFRKNGDFEFTLIRRYYYFWLIRFVCDRYF 199
+++ + F + F IR +YF+L + V +RY+
Sbjct: 234 MLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYY 270
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 24.6 bits (51), Expect = 0.35
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -1
Query: 309 VIHRKFALFRKNGDFEFTLIRRYYYFWLIRFVCDRYF 199
+++ + F + F IR +YF+L + V +RY+
Sbjct: 234 MLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYY 270
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +1
Query: 277 LPEQCEFPMDYSNLPPKKKRKLIEYQ 354
+P FP+ Y N PP+ + Q
Sbjct: 111 IPVPVPFPVYYGNFPPRPMGPFVSMQ 136
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +1
Query: 277 LPEQCEFPMDYSNLPPKKKRKLIEYQ 354
+P FP+ Y N PP+ + Q
Sbjct: 111 IPVPVPFPVYYGNFPPRPMGPFVSMQ 136
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +1
Query: 277 LPEQCEFPMDYSNLPPKKKRKLIEYQ 354
+P FP+ Y N PP+ + Q
Sbjct: 111 IPVPVPFPVYYGNFPPRPMGPFVSMQ 136
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +1
Query: 277 LPEQCEFPMDYSNLPPKKKRKLIEYQ 354
+P FP+ Y N PP+ + Q
Sbjct: 111 IPVPVPFPVYYGNFPPRPMGPFVSMQ 136
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +1
Query: 277 LPEQCEFPMDYSNLPPKKKRKLIEYQ 354
+P FP+ Y N PP+ + Q
Sbjct: 344 IPVPVPFPVYYGNFPPRPMGPFVSIQ 369
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +1
Query: 277 LPEQCEFPMDYSNLPPKKKRKLIEYQ 354
+P FP+ Y N PP+ + Q
Sbjct: 344 IPVPVPFPVYYGNFPPRPMGPFVSIQ 369
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +1
Query: 277 LPEQCEFPMDYSNLPPKKKRKLIEYQ 354
+P FP+ Y N PP+ + Q
Sbjct: 344 IPVPVPFPVYYGNFPPRPMGPFVSIQ 369
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +1
Query: 277 LPEQCEFPMDYSNLPPKKKRKLIEYQ 354
+P FP+ Y N PP+ + Q
Sbjct: 344 IPVPVPFPVYYGNFPPRPMGPFVSIQ 369
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +1
Query: 277 LPEQCEFPMDYSNLPPKKKRKLIEYQ 354
+P FP+ Y N PP+ + Q
Sbjct: 333 IPVPVPFPVYYGNFPPRPMGPFVSIQ 358
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 2.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 187 LQPSKVTITHEANQP 231
L P + +I+HE NQP
Sbjct: 862 LIPEQTSISHENNQP 876
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 5.7
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +1
Query: 265 EVPILPEQCEFPMDYSNLPPKKKRKLIEYQ 354
++P+ P P+ Y N PP+ I Q
Sbjct: 110 QIPV-PVPVPVPVYYGNFPPRSMGPWISIQ 138
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 5.7
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +1
Query: 265 EVPILPEQCEFPMDYSNLPPKKKRKLIEYQ 354
++P+ P P+ Y N PP+ I Q
Sbjct: 110 QIPV-PVPVPVPVYYGNFPPRSMGPWISIQ 138
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 5.7
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +1
Query: 265 EVPILPEQCEFPMDYSNLPPKKKRKLIEYQ 354
++P+ P P+ Y N PP+ I Q
Sbjct: 110 QIPV-PVPVPVPVYYGNFPPRSMGPWISIQ 138
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 88 EQIPVPVYYGNFPPR 102
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 88 EQIPVPVYYGNFPPR 102
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 88 EQIPVPVYYGNFPPR 102
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 88 EQIPVPVYYGNFPPR 102
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 88 EQIPVPVYYGNFPPR 102
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 88 EQIPVPVYYGNFPPR 102
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 88 EQIPVPVYYGNFPPR 102
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 337 EQIPVPVYYGNFPPR 351
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 337 EQIPVPVYYGNFPPR 351
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 337 EQIPVPVYYGNFPPR 351
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 337 EQIPVPVYYGNFPPR 351
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 337 EQIPVPVYYGNFPPR 351
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 337 EQIPVPVYYGNFPPR 351
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 321 EQIPVPVYYGNFPPR 335
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 337 EQIPVPVYYGNFPPR 351
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.6 bits (41), Expect = 5.7
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +1
Query: 265 EVPILPEQCEFPMDYSNLPPKKKRKLIEYQ 354
++P+ P P+ Y N PP+ I Q
Sbjct: 343 QIPV-PVPVPVPVYYGNFPPRSMGPWISIQ 371
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.6 bits (41), Expect = 5.7
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 100 SPANIGMSDVNTDT 141
SPA+ G+SDV + T
Sbjct: 244 SPADSGVSDVESST 257
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.2 bits (40), Expect = 7.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 283 EQCEFPMDYSNLPPK 327
EQ P+ Y N PP+
Sbjct: 336 EQIPAPVYYGNFPPR 350
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 19.8 bits (39), Expect = 9.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 275 FFRNNANFRWITATC 319
FF ++ + RWI C
Sbjct: 112 FFNDDLSTRWIAFNC 126
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.8 bits (39), Expect = 9.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 275 FFRNNANFRWITATC 319
FF ++ + RWI C
Sbjct: 112 FFNDDLSTRWIAFNC 126
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.8 bits (39), Expect = 9.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 275 FFRNNANFRWITATC 319
FF ++ + RWI C
Sbjct: 112 FFNDDLSTRWIAFNC 126
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 19.8 bits (39), Expect = 9.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 298 PMDYSNLPPKKKRKLIEY 351
P +SN+ PK R + EY
Sbjct: 357 PTLFSNVTPKFPRNIDEY 374
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,439
Number of Sequences: 438
Number of extensions: 2003
Number of successful extensions: 37
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8184330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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