Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C14
         (478 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   5.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   5.5  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   7.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   9.6  
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    22   9.6  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -1

Query: 379 VESKPRCKTRQLHILLLAVFSSSTANRLHFTASRVP 272
           +E+  +  ++ LH      +S++T NR+    +R P
Sbjct: 366 IENHRKLLSKDLHACFYPYYSTTTLNRIARFTNRAP 401


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -1

Query: 379 VESKPRCKTRQLHILLLAVFSSSTANRLHFTASRVP 272
           +E+  +  ++ LH      +S++T NR+    +R P
Sbjct: 366 IENHRKLLSKDLHACFYPYYSTTTLNRIARFTNRAP 401


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 106 KDVLHQRNIIISKADVSALSICNSLLE 26
           KD+ H  NI+    D  AL I + +LE
Sbjct: 880 KDLKHGNNILHIAVDNDALDIVHYILE 906


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 218  INAAATGMGLLTNSGPQPWHPASSEVK 298
            I  AA G  L  ++  + W+PA  EVK
Sbjct: 2694 IVTAAVGAYLGASAANKSWNPAKWEVK 2720


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = +2

Query: 305 CRRAAEYC-KEQNVELARLATWFTLNQPHIDTNICGFFNVQQF 430
           CR    Y    QN+ LA+ +         I TNI  ++N   F
Sbjct: 119 CRNTPVYAWAGQNIALAQFSRMTNTISQLISTNIASWWNEYSF 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,297
Number of Sequences: 2352
Number of extensions: 10640
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)