Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_C14
(478 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 84 6e-17
U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical p... 33 0.080
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr... 33 0.080
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 32 0.19
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 32 0.19
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.24
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 28 3.0
U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated p... 28 3.0
AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein. 28 3.0
Z83114-4|CAB05554.4| 739|Caenorhabditis elegans Hypothetical pr... 27 5.3
U49829-10|AAA93389.2| 591|Caenorhabditis elegans Uncoordinated ... 27 7.0
U49829-9|AAQ81273.1| 673|Caenorhabditis elegans Uncoordinated p... 27 7.0
S66176-1|AAB28570.1| 591|Caenorhabditis elegans UNC-18 protein. 27 7.0
S34207-1|AAB21818.1| 673|Caenorhabditis elegans unc-18 protein. 27 7.0
AC024817-6|AAY86298.2| 488|Caenorhabditis elegans Hypothetical ... 27 7.0
Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical pr... 27 9.2
U55857-5|AAA98031.1| 602|Caenorhabditis elegans Hypothetical pr... 27 9.2
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane... 27 9.2
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 27 9.2
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 83.8 bits (198), Expect = 6e-17
Identities = 50/142 (35%), Positives = 70/142 (49%)
Frame = +2
Query: 11 ETLPTLEKAIADGKCRYIGLADYDVSLMKDIFEESEVKISTILSHSKSTLFDNRLQNYVN 190
ETL LE A + GK R+IGL Y + + F + ++ F VN
Sbjct: 220 ETLQALEMAKSSGKIRHIGLTGYPLGKLVYSFR--------YVWNAPKLYFS------VN 265
Query: 191 FFKRNGVGVINAAATGMGLLTNSGPQPWHPASSEVKSICRRAAEYCKEQNVELARLATWF 370
+ VIN+ A GLLT GP PWHPAS E+K C A YC +N+ +++LA +
Sbjct: 266 LSITRNIAVINSGALCWGLLTEKGPPPWHPASDEIKEACLAATTYCSSKNISISKLALDY 325
Query: 371 TLNQPHIDTNICGFFNVQQFHD 436
LN P++ + G +VQQ D
Sbjct: 326 ALNFPNVICCLVGMDSVQQVLD 347
>U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical
protein ZK328.7b protein.
Length = 1098
Score = 33.5 bits (73), Expect = 0.080
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 227 AATGMGLLTNSGPQPWHPASSEVKSICRRAAEYCKEQNVELAR 355
A+T L N+ PQ WH S V+ CR + E++++ A+
Sbjct: 981 ASTSYTTLLNTNPQHWHALSRVVELFCRNGEQNAAEKHLDRAK 1023
>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical protein
ZK328.7a protein.
Length = 1332
Score = 33.5 bits (73), Expect = 0.080
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 227 AATGMGLLTNSGPQPWHPASSEVKSICRRAAEYCKEQNVELAR 355
A+T L N+ PQ WH S V+ CR + E++++ A+
Sbjct: 981 ASTSYTTLLNTNPQHWHALSRVVELFCRNGEQNAAEKHLDRAK 1023
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 32.3 bits (70), Expect = 0.19
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +2
Query: 11 ETLPTLEKAIADGKCRYIGLADYDVSLMKDIFEESEVKISTILSHSKSTLFDNRLQNYVN 190
ET E A GKCR IGL+++ S ++ +++ +EVK + + +L+
Sbjct: 140 ETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQVKLR---E 196
Query: 191 FFKRNGVGVINAAATG 238
F K G+ V+ + G
Sbjct: 197 FCKEKGIVVVGYSPLG 212
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 32.3 bits (70), Expect = 0.19
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +2
Query: 11 ETLPTLEKAIADGKCRYIGLADYDVSLMKDIFEESEVKISTILSHSKSTLFDNRLQNYVN 190
ET E A GKCR IGL+++ S ++ +++ +EVK + + +L+
Sbjct: 140 ETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQVKLR---E 196
Query: 191 FFKRNGVGVINAAATG 238
F K G+ V+ + G
Sbjct: 197 FCKEKGIVVVGYSPLG 212
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.24
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +2
Query: 23 TLEKAIADGKCRYIGLADYDVSLMKDIFEESEVK 124
TLEKA G+ R IG+++Y+V + ++FE ++++
Sbjct: 146 TLEKAKESGRVRSIGVSNYEVYHLVEMFEYAKIR 179
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/38 (26%), Positives = 25/38 (65%)
Frame = +2
Query: 11 ETLPTLEKAIADGKCRYIGLADYDVSLMKDIFEESEVK 124
+T LEK +GK + +G++++ + ++ +++ +EVK
Sbjct: 143 DTWRALEKLYKEGKLKALGVSNFSCNQLQALYDAAEVK 180
>U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated
protein 45 protein.
Length = 961
Score = 28.3 bits (60), Expect = 3.0
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = -1
Query: 340 ILLLAVFSSSTANRLHFTASRVPRLRTTVCQQAHASCSCVDNAYTISFEKVDIILKAVIE 161
+L L +S + S R +C Q D TI EKVD+ A+I
Sbjct: 343 LLALLDVASQIPELCEYPVSAETRQHVAICLQRLEEDMVFDTKRTIFKEKVDMFFNALIS 402
Query: 160 QC 155
+C
Sbjct: 403 RC 404
>AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein.
Length = 961
Score = 28.3 bits (60), Expect = 3.0
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = -1
Query: 340 ILLLAVFSSSTANRLHFTASRVPRLRTTVCQQAHASCSCVDNAYTISFEKVDIILKAVIE 161
+L L +S + S R +C Q D TI EKVD+ A+I
Sbjct: 343 LLALLDVASQIPELCEYPVSAETRQHVAICLQRLEEDMVFDTKRTIFKEKVDMFFNALIS 402
Query: 160 QC 155
+C
Sbjct: 403 RC 404
>Z83114-4|CAB05554.4| 739|Caenorhabditis elegans Hypothetical
protein K09B11.10 protein.
Length = 739
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +1
Query: 136 PFPLEIYTVR*PP--SELCQLFQKKWCRRYQRSCNWHGPADKQWS 264
PFP ++R PP + Q C R RSC W A Q S
Sbjct: 234 PFPSSFSSLRIPPYDNSPLQRMSDLSCERPLRSCRWGNMAKSQLS 278
>U49829-10|AAA93389.2| 591|Caenorhabditis elegans Uncoordinated
protein 18, isoform a protein.
Length = 591
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 110 ESEVKISTILSHSKSTLFD---NRLQNYVNFFKRNGVGVINAAATGMGLLTNSG-PQPWH 277
E +++ + SK+ + D N+L + N + + NAA G+ ++T++G + W
Sbjct: 401 EDRLRLILLYILSKNGITDENLNKLLQHANISMADKETITNAAYLGLNIVTDTGRKKTWT 460
Query: 278 PASSE 292
P E
Sbjct: 461 PTKKE 465
>U49829-9|AAQ81273.1| 673|Caenorhabditis elegans Uncoordinated
protein 18, isoform c protein.
Length = 673
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 110 ESEVKISTILSHSKSTLFD---NRLQNYVNFFKRNGVGVINAAATGMGLLTNSG-PQPWH 277
E +++ + SK+ + D N+L + N + + NAA G+ ++T++G + W
Sbjct: 483 EDRLRLILLYILSKNGITDENLNKLLQHANISMADKETITNAAYLGLNIVTDTGRKKTWT 542
Query: 278 PASSE 292
P E
Sbjct: 543 PTKKE 547
>S66176-1|AAB28570.1| 591|Caenorhabditis elegans UNC-18 protein.
Length = 591
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 110 ESEVKISTILSHSKSTLFD---NRLQNYVNFFKRNGVGVINAAATGMGLLTNSG-PQPWH 277
E +++ + SK+ + D N+L + N + + NAA G+ ++T++G + W
Sbjct: 401 EDRLRLILLYILSKNGITDENLNKLLQHANISMADKETITNAAYLGLNIVTDTGRKKTWT 460
Query: 278 PASSE 292
P E
Sbjct: 461 PTKKE 465
>S34207-1|AAB21818.1| 673|Caenorhabditis elegans unc-18 protein.
Length = 673
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 110 ESEVKISTILSHSKSTLFD---NRLQNYVNFFKRNGVGVINAAATGMGLLTNSG-PQPWH 277
E +++ + SK+ + D N+L + N + + NAA G+ ++T++G + W
Sbjct: 483 EDRLRLILLYILSKNGITDENLNKLLQHANISMADKETITNAAYLGLNIVTDTGRKKTWT 542
Query: 278 PASSE 292
P E
Sbjct: 543 PTKKE 547
>AC024817-6|AAY86298.2| 488|Caenorhabditis elegans Hypothetical
protein Y54G2A.42 protein.
Length = 488
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 14 TLPTLEKAIADGKCRYIGLADYDVSLMKDIFEESEVKISTILSH-SKSTLFDN 169
TL L + D K +Y D DVS++ ++++ V I ++L +K T+FDN
Sbjct: 18 TLELLTRDQCDVKGKY-SKDDLDVSMVNYLYDQ-VVNIKSVLGELAKGTIFDN 68
>Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical
protein T24C2.1 protein.
Length = 711
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 415 EKTADVCVNVRLVESKPRCKTRQL-HILLLAVFSS 314
EK C N ++ S+ +CK + H+LL+ F+S
Sbjct: 610 EKQTSACYNATIISSQRQCKWSGVEHLLLIWSFAS 644
>U55857-5|AAA98031.1| 602|Caenorhabditis elegans Hypothetical
protein K08D10.5 protein.
Length = 602
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 214 RYQRSCNWHGPADK 255
RYQRSCNW DK
Sbjct: 571 RYQRSCNWSRLLDK 584
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 2 HEEETLPTLEKAIADGKCRYIGLADYD 82
+ ++T LEK A+GK R IG+++Y+
Sbjct: 127 YRKDTWIALEKLHAEGKIRSIGVSNYE 153
>AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane
protein RAM-5 protein.
Length = 711
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 415 EKTADVCVNVRLVESKPRCKTRQL-HILLLAVFSS 314
EK C N ++ S+ +CK + H+LL+ F+S
Sbjct: 610 EKQTSACYNATIISSQRQCKWSGVEHLLLIWSFAS 644
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 26.6 bits (56), Expect = 9.2
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 475 LMVSKTLRENVHDVVELLHVE-KTADVCVNVRLVESKPRC 359
+ V+KTL V +VVELL +E T + NV L K +C
Sbjct: 73 IKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLDAQKTKC 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,289,791
Number of Sequences: 27780
Number of extensions: 238407
Number of successful extensions: 745
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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