Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C13
         (139 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23DS0 Cluster: Adenylate and Guanylate cyclase catalyt...    30   8.7  

>UniRef50_Q23DS0 Cluster: Adenylate and Guanylate cyclase catalytic
            domain containing protein; n=1; Tetrahymena thermophila
            SB210|Rep: Adenylate and Guanylate cyclase catalytic
            domain containing protein - Tetrahymena thermophila SB210
          Length = 3179

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 4    RGVFCFSRVIIAS*D--GFLVTKRLHTRVCLHAINKN 108
            +G +C S +I+ +    GFL  KR  T+ CL   NKN
Sbjct: 2908 KGAYCMSDIILITLPIIGFLSQKRQSTKRCLEFFNKN 2944


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,019,373
Number of Sequences: 1657284
Number of extensions: 1752473
Number of successful extensions: 3276
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3276
length of database: 575,637,011
effective HSP length: 26
effective length of database: 532,547,627
effective search space used: 10118404913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)