Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C13
         (139 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    24   0.75 
AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding pr...    24   0.75 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    22   2.3  
AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    21   7.0  

>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 23.8 bits (49), Expect = 0.75
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 76  TRVCLHAINKNACH 117
           T VCL  +NK ACH
Sbjct: 226 TNVCLTNLNKLACH 239


>AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP36 protein.
          Length = 277

 Score = 23.8 bits (49), Expect = 0.75
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 76  TRVCLHAINKNACH 117
           T VCL  +NK ACH
Sbjct: 226 TNVCLTNLNKLACH 239


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 92   CKHTRVCKRLVTRN 51
            C H   CKRLV+ N
Sbjct: 1483 CPHRVACKRLVSMN 1496


>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 49  GFLVTKRLHTRVCLHAINKN 108
           G +  K L +R+ LH  N N
Sbjct: 12  GKIFEKLLESRMALHTFNNN 31


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,959
Number of Sequences: 2352
Number of extensions: 2344
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 25
effective length of database: 505,179
effective search space used: 10103580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)