Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C13
         (139 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   1.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    20   2.4  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    18   9.5  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    18   9.5  

>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
          protein.
          Length = 81

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 21 FSCYHCELRWVSSNQTFAHPRVLT 92
          FSC +CE  +VS      H R  T
Sbjct: 17 FSCKYCEKVYVSLGALKMHIRTHT 40



 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = +3

Query: 21 FSCYHC 38
          FSC HC
Sbjct: 71 FSCQHC 76


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 77  PACAYTQLIK 106
           P CAY QLI+
Sbjct: 264 PTCAYKQLIE 273


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 82  VCLHAINKNA 111
           +CLHAI  NA
Sbjct: 16  LCLHAIFVNA 25


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 82  VCLHAINKNA 111
           +CLHAI  NA
Sbjct: 16  LCLHAIFVNA 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,495
Number of Sequences: 438
Number of extensions: 428
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 26
effective length of database: 134,955
effective search space used:  2564145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)