Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_C12
(501 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137; Eukar... 251 6e-66
UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58; Eukary... 236 2e-61
UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal ... 167 1e-40
UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e cont... 148 8e-35
UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia... 123 3e-27
UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative; ... 116 2e-25
UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, wh... 109 3e-23
UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1; Encepha... 108 6e-23
UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9; Euryar... 108 6e-23
UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4; Euryar... 107 1e-22
UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4; Thermo... 105 6e-22
UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11; Archa... 101 7e-21
UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10; Archa... 101 7e-21
UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4; Methan... 97 1e-19
UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p... 93 4e-18
UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 89 7e-17
UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5; Haloba... 86 4e-16
UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiell... 81 1e-14
UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza ... 76 4e-13
UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 75 7e-13
UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1; uncul... 73 4e-12
UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1; Nanoar... 73 5e-12
UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory ... 60 2e-08
UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14; Bacter... 52 7e-06
UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycopla... 41 0.014
UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, wh... 37 0.29
UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4; Endopterygota|... 36 0.68
UniRef50_A0NKF0 Cluster: Rhamnosyltransferase; n=1; Oenococcus o... 34 2.1
UniRef50_Q5CLQ5 Cluster: COG1752: esterase of the alpha-beta hyd... 34 2.1
UniRef50_A6LHC7 Cluster: Putative outer membrane protein, probab... 33 2.7
UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 33 2.7
UniRef50_UPI000049A3BC Cluster: Sec7 domain protein; n=1; Entamo... 33 3.6
UniRef50_UPI0000494D12 Cluster: PREDICTED: hypothetical protein;... 33 3.6
UniRef50_Q026Q4 Cluster: Trigger factor; n=1; Solibacter usitatu... 33 3.6
UniRef50_A6Q707 Cluster: Periplasmic nitrate reductase component... 33 3.6
UniRef50_A6CG73 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_A1L3M1 Cluster: LOC100037042 protein; n=1; Xenopus laev... 33 4.8
UniRef50_A6LXE0 Cluster: Putative uncharacterized protein precur... 33 4.8
UniRef50_Q5TKA1 Cluster: Lin-9 homolog; n=39; Eumetazoa|Rep: Lin... 33 4.8
UniRef50_Q9SFE9 Cluster: T26F17.9; n=13; Magnoliophyta|Rep: T26F... 32 6.3
UniRef50_Q04DS5 Cluster: ABC-type cobalt transport system, ATPas... 32 8.3
UniRef50_Q290U4 Cluster: GA15861-PA; n=1; Drosophila pseudoobscu... 32 8.3
UniRef50_A7S3C9 Cluster: Predicted protein; n=1; Nematostella ve... 32 8.3
UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, wh... 32 8.3
>UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137;
Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 251 bits (615), Expect = 6e-66
Identities = 119/151 (78%), Positives = 130/151 (86%)
Frame = +2
Query: 47 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 226
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 227 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 406
EEEV+K+VTI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 407 RGMRHYWGLRVXXXXXXXXXXXXXXXXVSKK 499
RG+RHYWGLRV VSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGRTVGVSKK 151
>UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58;
Eukaryota|Rep: 40S ribosomal protein S18 - Homo sapiens
(Human)
Length = 152
Score = 236 bits (578), Expect = 2e-61
Identities = 107/151 (70%), Positives = 128/151 (84%)
Frame = +2
Query: 47 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 226
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 227 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 406
E+EVE+++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 407 RGMRHYWGLRVXXXXXXXXXXXXXXXXVSKK 499
RG+RH+WGLRV VSKK
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKK 151
>UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal
protein S18; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S18 - Rattus norvegicus
Length = 170
Score = 167 bits (406), Expect = 1e-40
Identities = 78/131 (59%), Positives = 106/131 (80%)
Frame = +2
Query: 47 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 226
MSLVI +K QHIL+++NTNID +++ FA+TA KG +RY+++VL+KA IDL K AGE T
Sbjct: 1 MSLVISEKSQHILQVLNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELT 60
Query: 227 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 406
E++VE+++TIM NPRQY+IP QK + DG+ SQ+ ++ LD+KLRE+LERLKKIRAH
Sbjct: 61 EDKVERVITIMQNPRQYEIP------QKGVRDGRCSQVPANGLDNKLREELERLKKIRAH 114
Query: 407 RGMRHYWGLRV 439
RG+RH+WGL V
Sbjct: 115 RGLRHFWGLHV 125
>UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: ribosomal protein S13p/S18e containing
protein - Tetrahymena thermophila SB210
Length = 155
Score = 148 bits (358), Expect = 8e-35
Identities = 69/133 (51%), Positives = 96/133 (72%), Gaps = 2/133 (1%)
Frame = +2
Query: 47 MSLVIPDK--FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 220
MS VI + F++I RI+NTNIDGKR A+T I+G+GRR++ I+ K ID + RAG
Sbjct: 1 MSFVIEKESDFKYIHRILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGL 60
Query: 221 CTEEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIR 400
TE++ KI ++++P + IP W LNR D DGK Q+ S+ LD+K+REDLERLKKI+
Sbjct: 61 LTEDQCNKITDLIADPEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIK 120
Query: 401 AHRGMRHYWGLRV 439
+HRG+RH+WGL+V
Sbjct: 121 SHRGLRHFWGLKV 133
>UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_8004_7540 - Giardia lamblia ATCC
50803
Length = 154
Score = 123 bits (296), Expect = 3e-27
Identities = 56/130 (43%), Positives = 85/130 (65%)
Frame = +2
Query: 50 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 229
++V P+ ++ +LR+ NTNI GK + A+ IKG+GRR++N+ LKKA+ID+ KRAGE T
Sbjct: 3 TIVQPNDYRDLLRMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTA 62
Query: 230 EEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 409
E + ++ ++ +P + IP W LNR D GK + + + S R DLERL+K R R
Sbjct: 63 AEEDALMKVLEDPLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCER 122
Query: 410 GMRHYWGLRV 439
G+RH+ L+V
Sbjct: 123 GVRHHHNLKV 132
>UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S13p/S18e, putative - Trichomonas vaginalis G3
Length = 155
Score = 116 bits (280), Expect = 2e-25
Identities = 51/126 (40%), Positives = 89/126 (70%)
Frame = +2
Query: 62 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 241
P F+ ++R+++TN+DG+R + A+T I G+GRR++ V+++A +D +RAG T +E E
Sbjct: 8 PAAFRDMVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEE 67
Query: 242 KIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 421
IV+I+ NP +++IP W LNR+ D G+ + +++L + +R ++ER+KK+R RG+RH
Sbjct: 68 LIVSIIQNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRH 127
Query: 422 YWGLRV 439
GL+V
Sbjct: 128 GLGLKV 133
>UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 193
Score = 109 bits (263), Expect = 3e-23
Identities = 57/134 (42%), Positives = 92/134 (68%), Gaps = 4/134 (2%)
Frame = +2
Query: 47 MSLVIP--DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 220
MSLV+ D+F+ I+RI+NTN+DGK+++ + + +IKG+GRR++ + K ++L KRAGE
Sbjct: 1 MSLVLEKADQFRQIIRILNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGE 60
Query: 221 CTEEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIR 400
T+EE KI ++ QY +D+ +GK ++T++ L++KLREDLER+KKI+
Sbjct: 61 LTDEEAHKITEVIKMVPQY---------IRDLKNGKNYEVTTNELETKLREDLERIKKIK 111
Query: 401 AHRG--MRHYWGLR 436
+ +RH+WGLR
Sbjct: 112 YSQWLCLRHHWGLR 125
>UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S18
- Encephalitozoon cuniculi
Length = 153
Score = 108 bits (260), Expect = 6e-23
Identities = 54/126 (42%), Positives = 82/126 (65%)
Frame = +2
Query: 62 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 241
P + Q+I+RI NTNIDG +++ FA+T I+G+G R + + K+ IDL KRAGE E+E++
Sbjct: 7 PAEVQYIVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMK 66
Query: 242 KIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 421
+I + +P IP+ ++N Q+DI+DG S L + LD+ LR +ER KK + R R
Sbjct: 67 RISDAILDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRL 126
Query: 422 YWGLRV 439
GL+V
Sbjct: 127 DVGLKV 132
>UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanococcus jannaschii
Length = 150
Score = 108 bits (260), Expect = 6e-23
Identities = 48/122 (39%), Positives = 82/122 (67%)
Frame = +2
Query: 68 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 247
+F++++R+ T++DG +K++ A+ I GVG + +++ A +D +K AG TEEEV+KI
Sbjct: 5 EFKYLIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKI 64
Query: 248 VTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 427
++++P ++ IP W NR+KD V G+ + S+L +ED+ RLK+IR +RG+RH
Sbjct: 65 EEVLADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHEL 124
Query: 428 GL 433
GL
Sbjct: 125 GL 126
>UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanosarcina acetivorans
Length = 162
Score = 107 bits (257), Expect = 1e-22
Identities = 50/125 (40%), Positives = 78/125 (62%)
Frame = +2
Query: 65 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 244
++ +H++RIMNT++ G + V +A+T + GVGRR + ++ K A +D G EEEV K
Sbjct: 18 EELRHLVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAK 77
Query: 245 IVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 424
+ T + +P W LNRQKD+ G+ L +++ RED+ LKK+RA+RG+RH
Sbjct: 78 LDTAIGKFEDI-VPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHE 136
Query: 425 WGLRV 439
GL+V
Sbjct: 137 RGLKV 141
>UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S13P -
Thermoplasma acidophilum
Length = 171
Score = 105 bits (252), Expect = 6e-22
Identities = 44/123 (35%), Positives = 86/123 (69%)
Frame = +2
Query: 71 FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIV 250
FQ+I+RI N +++G+R + A++ +KG+G R ++ ++ D+ +DK+ GE EE++EK+
Sbjct: 28 FQYIVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLR 87
Query: 251 TIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWG 430
+ ++Y +P+W LN +++ V GK L S++L+ +++ED+ +KKIR+++G+RH G
Sbjct: 88 EYV-EAKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKG 146
Query: 431 LRV 439
+V
Sbjct: 147 KKV 149
>UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11;
Archaea|Rep: 30S ribosomal protein S13P - Uncultured
methanogenic archaeon RC-I
Length = 224
Score = 101 bits (243), Expect = 7e-21
Identities = 47/125 (37%), Positives = 80/125 (64%)
Frame = +2
Query: 65 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 244
D+ ++I+RI NT++DG + V FA+T IKG+G R S I+ ++A +D G E+V+K
Sbjct: 67 DEIKYIVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDK 126
Query: 245 IVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 424
+ ++ N + +P W LNR++DI G+ L +L ++ED+ +KKIR+++G+RH
Sbjct: 127 LRAVIDN-LEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHE 185
Query: 425 WGLRV 439
G +V
Sbjct: 186 RGQKV 190
>UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10;
Archaea|Rep: 30S ribosomal protein S13P - Sulfolobus
tokodaii
Length = 172
Score = 101 bits (243), Expect = 7e-21
Identities = 44/124 (35%), Positives = 81/124 (65%)
Frame = +2
Query: 68 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 247
+F++I+R+ ++DG KV +A+ +KG+G + ++ K +D D+R GE ++E+++KI
Sbjct: 6 QFKYIVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKI 65
Query: 248 VTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 427
+++ + ++P+W NR+KD G L +S+L +R D+ER KKI++ RG+RH
Sbjct: 66 ENYLTDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSL 125
Query: 428 GLRV 439
GL+V
Sbjct: 126 GLKV 129
>UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4;
Methanococcus|Rep: 30S ribosomal protein S13P -
Methanococcus maripaludis
Length = 149
Score = 97.5 bits (232), Expect = 1e-19
Identities = 40/118 (33%), Positives = 76/118 (64%)
Frame = +2
Query: 68 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 247
+F+H +RI T+++GK + +A+ +KG+GR + V++ ++D ++AG +E+V KI
Sbjct: 5 EFKHRIRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKI 64
Query: 248 VTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 421
+++ +P + IP W NR+KD+ G L ++L ++ED+ +KKIR ++G+RH
Sbjct: 65 ESVLEDPATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRH 122
>UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p -
Drosophila melanogaster (Fruit fly)
Length = 246
Score = 92.7 bits (220), Expect = 4e-18
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = +2
Query: 143 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIP 286
IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K+VTI+SNP QYK+P
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
>UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S13P -
Cenarchaeum symbiosum
Length = 227
Score = 88.6 bits (210), Expect = 7e-17
Identities = 38/124 (30%), Positives = 75/124 (60%)
Frame = +2
Query: 68 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKI 247
+++HI+RI+ ++ G++K + + I+G+G ++ +L ID + G T+E+V I
Sbjct: 50 EYKHIVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASI 109
Query: 248 VTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 427
++ +P P WFLNR+KD+ G+ + +S+++ +R D+ER + + +G RH +
Sbjct: 110 EKLLQDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMF 169
Query: 428 GLRV 439
GL+V
Sbjct: 170 GLKV 173
>UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 86.2 bits (204), Expect = 4e-16
Identities = 40/125 (32%), Positives = 74/125 (59%)
Frame = +2
Query: 65 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 244
+ ++ +RI T++DG + V A+T + G+G R + I+ +KAD+D G+ ++ +E+
Sbjct: 18 EDIRYFVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIER 77
Query: 245 IVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 424
+V + N +P+W N QKD G+ + T ++L R+D+ R+K I ++RG+RH
Sbjct: 78 VVERVENFAD-DVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHK 136
Query: 425 WGLRV 439
G +V
Sbjct: 137 RGQKV 141
>UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiella
natans|Rep: Ribosomal protein S18 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 159
Score = 81.0 bits (191), Expect = 1e-14
Identities = 39/119 (32%), Positives = 67/119 (56%)
Frame = +2
Query: 65 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 244
+K +RI + NI+G F + IKGVG R SN++ K D++ + + ++E+
Sbjct: 13 EKSMTFIRIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEE 72
Query: 245 IVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 421
+V I + P W +NR+ D + G + S+ LDS L+ED++RL I+ ++G+RH
Sbjct: 73 VVNIFGKSSRKAFPSWLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTIKNNKGLRH 131
>UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Ribosomal protein
S18-like - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 76.2 bits (179), Expect = 4e-13
Identities = 36/66 (54%), Positives = 44/66 (66%)
Frame = +2
Query: 302 RQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVXXXXXXXXXXXXXX 481
++KD DG++SQ+ S+ LD KLR+DLERLKKIR HRG+RHYWGLRV
Sbjct: 79 QKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKT 138
Query: 482 XXVSKK 499
VSKK
Sbjct: 139 VGVSKK 144
>UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2;
Thermoproteaceae|Rep: 30S ribosomal protein S13P -
Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
Length = 152
Score = 75.4 bits (177), Expect = 7e-13
Identities = 38/120 (31%), Positives = 69/120 (57%)
Frame = +2
Query: 80 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIM 259
I+R+ +T+++G ++V +A+ I+G+G + + K ID G EE++ K+ +
Sbjct: 8 IVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAV 67
Query: 260 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 439
N + P WFLNR+KD G+ L S L + D++ +KK+++ +G+RH GL+V
Sbjct: 68 RNLHEVA-PAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKV 126
>UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1;
uncultured euryarchaeote ARMAN-2|Rep: SSU ribosomal
protein S13AB - uncultured euryarchaeote ARMAN-2
Length = 177
Score = 72.9 bits (171), Expect = 4e-12
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Frame = +2
Query: 68 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN----IVLKKADIDLDKRAGECTEEE 235
K I+RI N +I+G + A+ +KG+G+ S+ ++ K +ID G E +
Sbjct: 15 KAMSIVRIANKDINGGLNIQRALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQ 74
Query: 236 VEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGM 415
V ++ ++ +P +Y +P + LNR+ D+ GK L ++L +R+ + R +R RG
Sbjct: 75 VTQVEELIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGY 134
Query: 416 RHYWGLRV 439
RH +G +V
Sbjct: 135 RHQYGQKV 142
>UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S13P -
Nanoarchaeum equitans
Length = 153
Score = 72.5 bits (170), Expect = 5e-12
Identities = 36/120 (30%), Positives = 64/120 (53%)
Frame = +2
Query: 80 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIM 259
I+ I + ++DG + + + + GV +++ V ID ++ G ++EE+EK+ +
Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72
Query: 260 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 439
NP +Y IP W NR++D GK L ++ + D++R +I + RG RH GL V
Sbjct: 73 RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPV 132
>UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory
specific medium-chain acyl CoA synthetase; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
olfactory specific medium-chain acyl CoA synthetase -
Ornithorhynchus anatinus
Length = 176
Score = 60.5 bits (140), Expect = 2e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 257 MSNPRQYKIPDWFLNRQKDIVDGKYSQL 340
M NPRQYKIPDWFLNRQKD+ DGKYSQ+
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQV 28
>UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14;
Bacteria|Rep: 30S ribosomal protein S13 - Thermotoga
maritima
Length = 125
Score = 52.0 bits (119), Expect = 7e-06
Identities = 41/118 (34%), Positives = 61/118 (51%)
Frame = +2
Query: 86 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSN 265
RI+ + +KV A+T I G+GR S +LK ID +KR G+ T+EE+ KI
Sbjct: 3 RIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKIT----- 57
Query: 266 PRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 439
+Y I D F V+G+ L S++ ++ RL +I +RG+RH GL V
Sbjct: 58 --KY-IQDHFK------VEGE--------LRSEVERNIRRLIEIGCYRGIRHKLGLPV 98
>UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S13 -
Mycoplasma hyopneumoniae (strain 232)
Length = 137
Score = 41.1 bits (92), Expect = 0.014
Identities = 26/118 (22%), Positives = 62/118 (52%)
Frame = +2
Query: 86 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSN 265
R++N I ++++ A+ +I G+G+ + +++K +++ G+ K + N
Sbjct: 3 RVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQEEKFGK-------KFPILTEN 55
Query: 266 PRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 439
+ +I + L +D+ + T +L +++ +++RL +I+ +RG+RH GL V
Sbjct: 56 TKVKEINEEVLQVIRDVAK---TYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPV 110
>UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 367
Score = 36.7 bits (81), Expect = 0.29
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 164 YSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDG 325
Y N + D + DK + E ++E E+++T++ + KI DW +KD+ DG
Sbjct: 93 YQNAIDSAQD-EKDKYSRETLQKEKEELITLICEMKHSKIEDWLKTIKKDLPDG 145
>UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4;
Endopterygota|Rep: ENSANGP00000013280 - Anopheles
gambiae str. PEST
Length = 183
Score = 35.5 bits (78), Expect = 0.68
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +2
Query: 104 IDGKRKVMFAMTAIKGVGRRYSNIVLK---KADI-DLDKRAGECTEEEVEK 244
+D K KV A G+GR +S +LK K I DLD AGE T EE+EK
Sbjct: 1 MDLKNKVALVTGAATGLGRAFSEELLKHGAKVVICDLDSDAGELTVEELEK 51
>UniRef50_A0NKF0 Cluster: Rhamnosyltransferase; n=1; Oenococcus oeni
ATCC BAA-1163|Rep: Rhamnosyltransferase - Oenococcus
oeni ATCC BAA-1163
Length = 311
Score = 33.9 bits (74), Expect = 2.1
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 74 QHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVT 253
QH ++ T + K +F + I + Y N + KK +L K GEC +E +
Sbjct: 215 QHSSNVVGTTGNNLFKKIFKIREI--FNKFYKNGLFKKQANELLKNYGECLSKEKRNAIN 272
Query: 254 I-MSNPRQYKIPDWFLNRQK 310
I +S+ RQ K W L + K
Sbjct: 273 IFLSSNRQLKEVFWILKKIK 292
>UniRef50_Q5CLQ5 Cluster: COG1752: esterase of the alpha-beta
hydrolase superfamily; n=2; Cryptosporidium|Rep:
COG1752: esterase of the alpha-beta hydrolase
superfamily - Cryptosporidium hominis
Length = 794
Score = 33.9 bits (74), Expect = 2.1
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +2
Query: 65 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 244
+ F +L+ +N +I K + + + SN K DK+ + E
Sbjct: 645 NSFVVVLKSLNDDIQRLNKTLITIDSFLKSSNNISNKATKLLKYIEDKQKKGIFSAKFED 704
Query: 245 IVTIMSNPRQYK-----IPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKI 397
++T++S Y I +N ++ IVD K+SQL + + LRE E K+
Sbjct: 705 VITLLSLYEDYVEKLQGIRIKEINSRRIIVDSKHSQLILARIIIALREQNEHFPKL 760
>UniRef50_A6LHC7 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Parabacteroides
distasonis ATCC 8503|Rep: Putative outer membrane
protein, probably involved in nutrient binding -
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
/ NCTC11152)
Length = 531
Score = 33.5 bits (73), Expect = 2.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 161 RYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIPDW 292
RYS ++ KA+ + K G+ T+E V+ I ++ R +K DW
Sbjct: 410 RYSEVIYNKAEALMRKNGGKATQEVVDMINSV--RQRSFKAEDW 451
>UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=1; Flavobacterium johnsoniae UW101|Rep: DNA-(Apurinic
or apyrimidinic site) lyase - Flavobacterium johnsoniae
UW101
Length = 216
Score = 33.5 bits (73), Expect = 2.7
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 62 PDKFQHILRIMNT--NIDGKRKVMFAMTAIKGVGRRYSNIVLKKAD 193
P K Q +L I +T N + M +TA+KG+GR+ +N++L++ +
Sbjct: 87 PTKAQWLLEIAHTIQNDNDIPLTMSGLTALKGIGRKSANVILRETE 132
>UniRef50_UPI000049A3BC Cluster: Sec7 domain protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: Sec7 domain protein -
Entamoeba histolytica HM-1:IMSS
Length = 1396
Score = 33.1 bits (72), Expect = 3.6
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 236 VEKIVTIMSNPRQYKIPDWFLNRQKDI-VDGKYSQLTSSNLDSKLREDLER 385
V +VT+++ +Y DW L + D KY +TS N S++R D+E+
Sbjct: 186 VPPVVTLLTTSAKYSTDDWCLPDAVHVKSDNKY--MTSVNFSSRIRSDIEK 234
>UniRef50_UPI0000494D12 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 157
Score = 33.1 bits (72), Expect = 3.6
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 175 CVEKGGYRS*QACRRMH*RRS*KNCYNHVKPQA-IQNTRLVSQQTKGYC*W 324
C ++ G R Q C R++ R +NC H++P + + R SQ T G W
Sbjct: 30 CAKERGVRGTQPCPRIYLRLPAQNCLGHLRPSSQAASDRPKSQPTSGELCW 80
>UniRef50_Q026Q4 Cluster: Trigger factor; n=1; Solibacter usitatus
Ellin6076|Rep: Trigger factor - Solibacter usitatus
(strain Ellin6076)
Length = 422
Score = 33.1 bits (72), Expect = 3.6
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +2
Query: 206 KRAGECTEEEVEKIVTIMSNPRQYKIPDWFLNRQ-KDIVDGKYSQLTSSNLD-SKLREDL 379
+R E +E KIV + + ++ +P+ F+ RQ ++ V+ + +D SKL+ D
Sbjct: 272 QRQYEAQQEAKNKIVDKLVDAHEFPVPEVFVERQIRNRVEQSLRAMAEQGVDPSKLKLDW 331
Query: 380 ERLKKIRAHRGMR 418
E++K+ + + R
Sbjct: 332 EKVKEAQREKATR 344
>UniRef50_A6Q707 Cluster: Periplasmic nitrate reductase component
NapD; n=1; Sulfurovum sp. NBC37-1|Rep: Periplasmic
nitrate reductase component NapD - Sulfurovum sp.
(strain NBC37-1)
Length = 119
Score = 33.1 bits (72), Expect = 3.6
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 215 GECTEEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSN-LDSKLREDLERLK 391
G+ EEE+EK+V I P D + Q+D +D + +L N + L +D ++
Sbjct: 46 GKGVEEEIEKLVKIQRLPNVI-AADMMMTYQEDELDAEVKRLEEENPVPDVLNDDDIDVR 104
Query: 392 KIRAHRGMRH 421
+ H +RH
Sbjct: 105 DVEYHGDLRH 114
>UniRef50_A6CG73 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 562
Score = 33.1 bits (72), Expect = 3.6
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Frame = +2
Query: 41 AKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN-IVLKKADIDLDKRAG 217
A SL + + + N GK K++ + GR + N ++L+ D +
Sbjct: 12 APESLPVEFDMAPVTIFVGPNNSGKSKILKEIRRFCSEGRSHPNDLILEHLTFDQNNTPD 71
Query: 218 ECTEEEVEKIVTIMSNPR--QYKIPDWFL----NRQKDIVDGK-YSQLTSSNLDS 361
E EE++ + I+ PR ++ IP + +++K + + K +S + N+DS
Sbjct: 72 EIPEEQIHLLKNIIQQPRDHEHTIPGYIYVGDKSKRKHVDERKLFSAFSKPNIDS 126
>UniRef50_A1L3M1 Cluster: LOC100037042 protein; n=1; Xenopus
laevis|Rep: LOC100037042 protein - Xenopus laevis
(African clawed frog)
Length = 384
Score = 32.7 bits (71), Expect = 4.8
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 248 VTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLK 391
V I ++ KIPD LN + V +S+ + N +S+L+ D +R+K
Sbjct: 6 VGIHKEEQEQKIPDPLLNGDAEDVPQHFSETPTCNTESRLQADQQRIK 53
>UniRef50_A6LXE0 Cluster: Putative uncharacterized protein
precursor; n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Putative uncharacterized protein precursor - Clostridium
beijerinckii NCIMB 8052
Length = 445
Score = 32.7 bits (71), Expect = 4.8
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 152 VGRRYSNIVLKKADIDLDKRAGECTEEEVE----KIVTIMSNPRQYKIPDWFLNRQKDIV 319
V +RY+ I+LKK DID K E +++ K+ ++ P Q + LN+ +D +
Sbjct: 148 VTKRYNAIILKKIDIDKLKTGLEIKNNDLDALKIKVSVGLAIPNQLEDKQIELNKAQDEI 207
Query: 320 DGKYSQLTSSNLD 358
K + L +NLD
Sbjct: 208 KAKENSL-KNNLD 219
>UniRef50_Q5TKA1 Cluster: Lin-9 homolog; n=39; Eumetazoa|Rep: Lin-9
homolog - Homo sapiens (Human)
Length = 542
Score = 32.7 bits (71), Expect = 4.8
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 32 IQIAKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLD 205
IQ+ ++S ++ K +HI ++ N + ++ ++M RRY+ IVL+ ++ D
Sbjct: 344 IQVTRLSKILMIKKEHIKKLREMNTEAEKLKSYSMPISIEFQRRYATIVLELEQLNKD 401
>UniRef50_Q9SFE9 Cluster: T26F17.9; n=13; Magnoliophyta|Rep:
T26F17.9 - Arabidopsis thaliana (Mouse-ear cress)
Length = 341
Score = 32.3 bits (70), Expect = 6.3
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = -1
Query: 324 PSTISFCLLRNQSGIL-YCLGFDMIVTIFSTSSSVHSPARLSRSISAFFNTMLEYRRP-T 151
PS S ++ SG+L +CL F + I ST++ + A + A F + + +R P +
Sbjct: 226 PSPWSALIILFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGNLKVAVAVFVSWMIFRNPIS 285
Query: 150 PLIAVIANITL 118
P+ AV ITL
Sbjct: 286 PMNAVGCGITL 296
>UniRef50_Q04DS5 Cluster: ABC-type cobalt transport system, ATPase
component; n=1; Oenococcus oeni PSU-1|Rep: ABC-type
cobalt transport system, ATPase component - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 562
Score = 31.9 bits (69), Expect = 8.3
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -1
Query: 267 GFDMIVTIFSTSSSVHSPARLSRSISAFFNTMLEYRRPTP--LIAVIANITLRLPSMFVF 94
GFD+ + T S + +S+ IS + NT + ++P P LI I N+ P VF
Sbjct: 256 GFDLSLEKHLTDLSSLNQELVSKKISNWLNTQISVKKPNPGQLILSIKNLFFSYPKQSVF 315
>UniRef50_Q290U4 Cluster: GA15861-PA; n=1; Drosophila
pseudoobscura|Rep: GA15861-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 354
Score = 31.9 bits (69), Expect = 8.3
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 236 VEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 409
++ I ++ + ++ I WF+N K + + K + N SKL + E+LK + HR
Sbjct: 185 MKSIEVLICDEEEFSI--WFMNNLKHLKNLKQLTIRGKNYPSKLLDIAEKLKAVGRHR 240
>UniRef50_A7S3C9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 31.9 bits (69), Expect = 8.3
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 218 ECTEEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTS--SNLDSKLREDLERLK 391
E TE V K + I N + Y+ DW LN V+G + D KL LER K
Sbjct: 31 ELTETPVRKAMFIQVN-QTYEETDWILNLPD--VNGTLEGIVGWVDLQDPKLESILERYK 87
Query: 392 KIRAHRGMRH 421
K RG+R+
Sbjct: 88 KFPKFRGVRN 97
>UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_70,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 713
Score = 31.9 bits (69), Expect = 8.3
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +2
Query: 164 YSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIPDWFLNRQK 310
Y + +K ++D K C ++E+EK + SNP + W + +K
Sbjct: 533 YMKVQGQKNELDFHKLINSCLDKEIEKNLKNFSNPATIDLYPWMIKYRK 581
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,503,467
Number of Sequences: 1657284
Number of extensions: 8258699
Number of successful extensions: 24035
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 23518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24023
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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