Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C12
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   3.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   3.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.7  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   6.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.2  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   8.2  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 103 VRIHNTKNMLKFVW 62
           VR+ N K + KF W
Sbjct: 38  VRVENGKKVFKFAW 51


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 103 VRIHNTKNMLKFVW 62
           VR+ N K + KF W
Sbjct: 38  VRVENGKKVFKFAW 51


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 116 ACHQCSYS*YEEYAEICL 63
           AC+ C Y+  + Y E C+
Sbjct: 72  ACYDCPYNTQDCYREDCI 89


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +1

Query: 124 YVCYDCY*RSWTSIFQHCVEKGGYR 198
           Y C + + R  T    HC +  G R
Sbjct: 82  YCCRESFLRERTITLTHCYDPDGVR 106


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -2

Query: 191 PPFSTQCWNIDVQ 153
           PPF  + W++D++
Sbjct: 536 PPFLAEIWDVDLK 548


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 185 KADIDLDKRAGECTEEEVEK 244
           K DI  DK+A +    EVEK
Sbjct: 77  KKDIRADKKALQKLRREVEK 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,497
Number of Sequences: 336
Number of extensions: 2230
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)