Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C11
         (395 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   1.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   1.9  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   1.9  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   1.9  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   1.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   7.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 69  IHDGIPRKEIPLFTDHVMLVKEQCKDAW 152
           +H  +PRKEIP  +   +L +  C + +
Sbjct: 822 LHGVVPRKEIPAKSAEQILAEGGCPNLY 849


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 379 LTHNNNFTLSTVWRWNLFHQKCKLV 305
           L   +NF L  +WR   +H K   V
Sbjct: 382 LLETDNFFLREIWRTVKYHNKTSSV 406


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 379 LTHNNNFTLSTVWRWNLFHQKCKLV 305
           L   +NF L  +WR   +H K   V
Sbjct: 382 LLETDNFFLREIWRTVKYHNKTSSV 406


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 379 LTHNNNFTLSTVWRWNLFHQKCKLV 305
           L   +NF L  +WR   +H K   V
Sbjct: 382 LLETDNFFLREIWRTVKYHNKTSSV 406


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 379 LTHNNNFTLSTVWRWNLFHQKCKLV 305
           L   +NF L  +WR   +H K   V
Sbjct: 382 LLETDNFFLREIWRTVKYHNKTSSV 406


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 379 LTHNNNFTLSTVWRWNLFHQKCKLV 305
           L   +NF L  +WR   +H K   V
Sbjct: 381 LLETDNFFLREIWRTVKYHNKTSSV 405


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +3

Query: 213 HISLHPWI 236
           H+ +HPWI
Sbjct: 542 HVWIHPWI 549


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,019
Number of Sequences: 336
Number of extensions: 2288
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)