Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C11
         (395 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110915-1|AAI10916.1|  553|Homo sapiens ASB3 protein protein.         28   9.7  
BC009569-1|AAH09569.1|  518|Homo sapiens ankyrin repeat and SOCS...    28   9.7  
BC006488-1|AAH06488.1|  518|Homo sapiens ankyrin repeat and SOCS...    28   9.7  
AK222715-1|BAD96435.1|  512|Homo sapiens ankyrin repeat and SOCS...    28   9.7  
AK222595-1|BAD96315.1|  518|Homo sapiens ankyrin repeat and SOCS...    28   9.7  
AK001283-1|BAA91599.1|  445|Homo sapiens protein ( Homo sapiens ...    28   9.7  
AK000985-1|BAA91455.1|  518|Homo sapiens protein ( Homo sapiens ...    28   9.7  
AF156778-1|AAD41895.1|  518|Homo sapiens ASB-3 protein protein.        28   9.7  
AC007883-1|AAY24350.1|  326|Homo sapiens unknown protein.              28   9.7  
AB209795-1|BAD93032.1|  340|Homo sapiens ankyrin repeat and SOCS...    28   9.7  

>BC110915-1|AAI10916.1|  553|Homo sapiens ASB3 protein protein.
          Length = 553

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 271 VFRIVLSHFMASIHGCRDMCGWMALY 194
           V R++L H  A+++G   MCGW +L+
Sbjct: 162 VLRLLLQHG-ANVNGSHSMCGWNSLH 186


>BC009569-1|AAH09569.1|  518|Homo sapiens ankyrin repeat and SOCS
           box-containing 3 protein.
          Length = 518

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 271 VFRIVLSHFMASIHGCRDMCGWMALY 194
           V R++L H  A+++G   MCGW +L+
Sbjct: 127 VLRLLLQHG-ANVNGSHSMCGWNSLH 151


>BC006488-1|AAH06488.1|  518|Homo sapiens ankyrin repeat and SOCS
           box-containing 3 protein.
          Length = 518

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 271 VFRIVLSHFMASIHGCRDMCGWMALY 194
           V R++L H  A+++G   MCGW +L+
Sbjct: 127 VLRLLLQHG-ANVNGSHSMCGWNSLH 151


>AK222715-1|BAD96435.1|  512|Homo sapiens ankyrin repeat and SOCS
           box-containing protein 3 isoform a variant protein.
          Length = 512

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 271 VFRIVLSHFMASIHGCRDMCGWMALY 194
           V R++L H  A+++G   MCGW +L+
Sbjct: 121 VLRLLLQHG-ANVNGSHSMCGWNSLH 145


>AK222595-1|BAD96315.1|  518|Homo sapiens ankyrin repeat and SOCS
           box-containing protein 3 isoform a variant protein.
          Length = 518

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 271 VFRIVLSHFMASIHGCRDMCGWMALY 194
           V R++L H  A+++G   MCGW +L+
Sbjct: 127 VLRLLLQHG-ANVNGSHSMCGWNSLH 151


>AK001283-1|BAA91599.1|  445|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10421 fis, clone NT2RP1000202, weakly similar to
           ANKYRIN. ).
          Length = 445

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 271 VFRIVLSHFMASIHGCRDMCGWMALY 194
           V R++L H  A+++G   MCGW +L+
Sbjct: 54  VLRLLLQHG-ANVNGSHSMCGWNSLH 78


>AK000985-1|BAA91455.1|  518|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10123 fis, clone HEMBA1002939, weakly similar to
           ANKYRIN R. ).
          Length = 518

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 271 VFRIVLSHFMASIHGCRDMCGWMALY 194
           V R++L H  A+++G   MCGW +L+
Sbjct: 127 VLRLLLQHG-ANVNGSHSMCGWNSLH 151


>AF156778-1|AAD41895.1|  518|Homo sapiens ASB-3 protein protein.
          Length = 518

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 271 VFRIVLSHFMASIHGCRDMCGWMALY 194
           V R++L H  A+++G   MCGW +L+
Sbjct: 127 VLRLLLQHG-ANVNGSHSMCGWNSLH 151


>AC007883-1|AAY24350.1|  326|Homo sapiens unknown protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 271 VFRIVLSHFMASIHGCRDMCGWMALY 194
           V R++L H  A+++G   MCGW +L+
Sbjct: 127 VLRLLLQHG-ANVNGSHSMCGWNSLH 151


>AB209795-1|BAD93032.1|  340|Homo sapiens ankyrin repeat and SOCS
           box-containing protein 3 isoform a variant protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 271 VFRIVLSHFMASIHGCRDMCGWMALY 194
           V R++L H  A+++G   MCGW +L+
Sbjct: 137 VLRLLLQHG-ANVNGSHSMCGWNSLH 161


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,798,594
Number of Sequences: 237096
Number of extensions: 1251565
Number of successful extensions: 2106
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2106
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)