Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C11
         (395 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075244-1|AAL68111.1|  267|Drosophila melanogaster AT20876p pro...    28   3.9  
AE014297-3143|AAN14376.1|  253|Drosophila melanogaster CG7059-PC...    28   3.9  
AE014297-3142|AAN14375.2|  262|Drosophila melanogaster CG7059-PD...    28   3.9  
AE014297-3141|AAF55985.2|  267|Drosophila melanogaster CG7059-PA...    28   3.9  

>AY075244-1|AAL68111.1|  267|Drosophila melanogaster AT20876p
           protein.
          Length = 267

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 33  KTELYYVMCRY*IHDGIPRKEIPLFTDHVMLVKEQCKDAWQ 155
           K   +Y +C   I D +PR E PL  + + +  ++ K  W+
Sbjct: 145 KNRYFYTICSNPIFDDVPRGEFPL-AESLHMCVDRVKPVWK 184


>AE014297-3143|AAN14376.1|  253|Drosophila melanogaster CG7059-PC,
           isoform C protein.
          Length = 253

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 33  KTELYYVMCRY*IHDGIPRKEIPLFTDHVMLVKEQCKDAWQ 155
           K   +Y +C   I D +PR E PL  + + +  ++ K  W+
Sbjct: 131 KNRYFYTICSNPIFDDVPRGEFPL-AESLHMCVDRVKPVWK 170


>AE014297-3142|AAN14375.2|  262|Drosophila melanogaster CG7059-PD,
           isoform D protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 33  KTELYYVMCRY*IHDGIPRKEIPLFTDHVMLVKEQCKDAWQ 155
           K   +Y +C   I D +PR E PL  + + +  ++ K  W+
Sbjct: 140 KNRYFYTICSNPIFDDVPRGEFPL-AESLHMCVDRVKPVWK 179


>AE014297-3141|AAF55985.2|  267|Drosophila melanogaster CG7059-PA,
           isoform A protein.
          Length = 267

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 33  KTELYYVMCRY*IHDGIPRKEIPLFTDHVMLVKEQCKDAWQ 155
           K   +Y +C   I D +PR E PL  + + +  ++ K  W+
Sbjct: 145 KNRYFYTICSNPIFDDVPRGEFPL-AESLHMCVDRVKPVWK 184


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,833,315
Number of Sequences: 53049
Number of extensions: 367946
Number of successful extensions: 1095
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)