Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C10
         (465 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U68567-1|AAC50812.1|  988|Homo sapiens lysosomal acid alpha-mann...    43   6e-04
U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosida...    43   6e-04
U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosida...    43   6e-04
U05572-1|AAB03816.1|  987|Homo sapiens alpha-mannosidase protein.      43   6e-04
BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, cla...    43   6e-04
AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, cla...    43   6e-04
AF372702-1|AAM15528.1|  665|Homo sapiens zinc finger protein 333...    34   0.28 
AB058709-1|BAB47435.1|  481|Homo sapiens KIAA1806 protein protein.     34   0.28 

>U68567-1|AAC50812.1|  988|Homo sapiens lysosomal acid
           alpha-mannosidase protein.
          Length = 988

 Score = 42.7 bits (96), Expect = 6e-04
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +1

Query: 88  NESSCLTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIP 258
           N S C  ++T+  F V +YN L  KV   + +PV +  + V DP G  +PS++   P
Sbjct: 474 NISICPLSQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFP 530


>U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosidase
           protein.
          Length = 1010

 Score = 42.7 bits (96), Expect = 6e-04
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +1

Query: 88  NESSCLTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIP 258
           N S C  ++T+  F V +YN L  KV   + +PV +  + V DP G  +PS++   P
Sbjct: 496 NISICPLSQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFP 552


>U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosidase
           protein.
          Length = 1011

 Score = 42.7 bits (96), Expect = 6e-04
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +1

Query: 88  NESSCLTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIP 258
           N S C  ++T+  F V +YN L  KV   + +PV +  + V DP G  +PS++   P
Sbjct: 497 NISICPLSQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFP 553


>U05572-1|AAB03816.1|  987|Homo sapiens alpha-mannosidase protein.
          Length = 987

 Score = 42.7 bits (96), Expect = 6e-04
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +1

Query: 88  NESSCLTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIP 258
           N S C  ++T+  F V +YN L  KV   + +PV +  + V DP G  +PS++   P
Sbjct: 473 NISICPLSQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFP 529


>BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, class
           2B, member 1 protein.
          Length = 1011

 Score = 42.7 bits (96), Expect = 6e-04
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +1

Query: 88  NESSCLTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIP 258
           N S C  ++T+  F V +YN L  KV   + +PV +  + V DP G  +PS++   P
Sbjct: 497 NISICPLSQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFP 553


>AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, class
           2B, member 1 precursor variant protein.
          Length = 1007

 Score = 42.7 bits (96), Expect = 6e-04
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +1

Query: 88  NESSCLTAETSDNFIVTIYNSLAWKVKKFIEIPVVKADYEVYDPKGNKLPSNLAEIP 258
           N S C  ++T+  F V +YN L  KV   + +PV +  + V DP G  +PS++   P
Sbjct: 493 NISICPLSQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFP 549


>AF372702-1|AAM15528.1|  665|Homo sapiens zinc finger protein 333
           protein.
          Length = 665

 Score = 33.9 bits (74), Expect = 0.28
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = +1

Query: 22  FNKMKQGKSSKQPLFNYDRCHFNESSCLTAETSDNFIVTIYNSLAWKVK 168
           +N++++  +S +PLF Y R H  E+SC   E  ++F  + +  +  K++
Sbjct: 312 YNELEKPFNSIEPLFQYQRIHAGEASCECQEIRNSFFQSAHLIVPEKIR 360


>AB058709-1|BAB47435.1|  481|Homo sapiens KIAA1806 protein protein.
          Length = 481

 Score = 33.9 bits (74), Expect = 0.28
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = +1

Query: 22  FNKMKQGKSSKQPLFNYDRCHFNESSCLTAETSDNFIVTIYNSLAWKVK 168
           +N++++  +S +PLF Y R H  E+SC   E  ++F  + +  +  K++
Sbjct: 128 YNELEKPFNSIEPLFQYQRIHAGEASCECQEIRNSFFQSAHLIVPEKIR 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.131    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,836,731
Number of Sequences: 237096
Number of extensions: 965428
Number of successful extensions: 1744
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1744
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)