Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C08
         (262 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         21   5.6  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         21   9.7  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -1

Query: 229 HFLCFAHRFASAIPISARFVHLATNVDTKNQHLWKSMFNLSKFC 98
           H  CF H      P S   V L +N    +  L  ++  L+K+C
Sbjct: 748 HADCFNHCLEVYRPSSGGAVALQSNGTCASLWLGNAIQTLNKYC 791


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 51  HHVHVSDQNPEIKHPS 4
           H  HV   +P + HP+
Sbjct: 127 HLPHVQQHHPSVHHPA 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,674
Number of Sequences: 2352
Number of extensions: 3673
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 13983072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)