Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C08
         (262 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF311320-1|AAG29853.1|  533|Homo sapiens glycerol 3-phosphate pe...    29   2.7  
U67733-1|AAC51320.1|  941|Homo sapiens PDE2A3 protein.                 29   3.6  
BC040974-1|AAH40974.1|  941|Homo sapiens phosphodiesterase 2A, c...    29   3.6  
AK131525-1|BAD18664.1|  685|Homo sapiens protein ( Homo sapiens ...    29   3.6  
AY495087-1|AAS75513.1|  932|Homo sapiens cGMP-stimulated phospho...    28   6.2  
AK127865-1|BAC87167.1|  139|Homo sapiens protein ( Homo sapiens ...    28   6.2  
AJ269529-1|CAB87248.1|  533|Homo sapiens glycerol 3-phosphate pe...    27   8.2  

>AF311320-1|AAG29853.1|  533|Homo sapiens glycerol 3-phosphate
           permease protein.
          Length = 533

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 23/73 (31%), Positives = 35/73 (47%)
 Frame = +2

Query: 8   GCLISGFWSLTCTW*MLVLKVNQSISVKIITKL**IEH*FP*VLILSVDISSKVDESGAN 187
           G LI+G+W  TC    LV+      ++ I+  L  IEH        ++   SK  E+G N
Sbjct: 207 GSLIAGYWVSTCWGLSLVVPGAIVAAMGIVCFLFLIEHPNDVRCSSTLVTHSKGYENGTN 266

Query: 188 RNSASKPMSKTQK 226
           R    K + K++K
Sbjct: 267 RLRLQKQILKSEK 279


>U67733-1|AAC51320.1|  941|Homo sapiens PDE2A3 protein.
          Length = 941

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = -1

Query: 217 FAHRFASAIPISARF-VHLATNVDTKNQHLWKSMFNLSKFCYYFYRN 80
           F + +    P  ARF + +         H W   F++S FCY  Y+N
Sbjct: 628 FINNYKIDCPTLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKN 674


>BC040974-1|AAH40974.1|  941|Homo sapiens phosphodiesterase 2A,
           cGMP-stimulated protein.
          Length = 941

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = -1

Query: 217 FAHRFASAIPISARF-VHLATNVDTKNQHLWKSMFNLSKFCYYFYRN 80
           F + +    P  ARF + +         H W   F++S FCY  Y+N
Sbjct: 628 FINNYKIDCPTLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKN 674


>AK131525-1|BAD18664.1|  685|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16750 fis, clone ADRGL2011190, highly  similar
           to cGMP-dependent 3',5'-cyclic phosphodiesterase (EC
           3.1.4.17). ).
          Length = 685

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = -1

Query: 217 FAHRFASAIPISARF-VHLATNVDTKNQHLWKSMFNLSKFCYYFYRN 80
           F + +    P  ARF + +         H W   F++S FCY  Y+N
Sbjct: 372 FINNYKIDCPTLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKN 418


>AY495087-1|AAS75513.1|  932|Homo sapiens cGMP-stimulated
           phosphodiesterase 4 protein.
          Length = 932

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = -1

Query: 217 FAHRFASAIPISARF-VHLATNVDTKNQHLWKSMFNLSKFCYYFYRN 80
           F + +    P  ARF + +         H W   F+ S FCY  Y+N
Sbjct: 619 FINNYKIDCPTLARFCLMVKKGYRDPPYHNWMHAFSASHFCYLLYKN 665


>AK127865-1|BAC87167.1|  139|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45968 fis, clone PLACE7016321. ).
          Length = 139

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 124 SMFNLSKFCYYFYRNTLIY 68
           S FN + FCYY YR    Y
Sbjct: 55  SPFNFAIFCYYIYRKAAFY 73


>AJ269529-1|CAB87248.1|  533|Homo sapiens glycerol 3-phosphate
           permease protein.
          Length = 533

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = +2

Query: 8   GCLISGFWSLTCTW*MLVLKVNQSISVKIITKL**IEH*FP*VLILSVDISSKVDESGAN 187
           G LI+G+W  TC     V+      ++ I+  L  IEH        ++   SK  E+G N
Sbjct: 207 GSLIAGYWVSTCWGLSFVVPGAIVAAMGIVCFLFLIEHPNDVRCSSTLVTHSKGYENGTN 266

Query: 188 RNSASKPMSKTQK 226
           R    K + K++K
Sbjct: 267 RLRLQKQILKSEK 279


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,280,699
Number of Sequences: 237096
Number of extensions: 491931
Number of successful extensions: 775
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)