Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C05
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   0.86 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.5  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   2.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.1  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.4 bits (48), Expect = 0.86
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 4   CRNRHEASFYKRISFQRTACLVDCLELH*HFLLEVYYFLK 123
           C   H AS   R+ FQ+   LV+   ++     E+  FLK
Sbjct: 336 CDEAHYASNCLRVQFQKKLLLVELSWMNDEAQQEINMFLK 375


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 157 VSILTLTF*FKKNYIRELSDDQIKINIF 240
           + IL   +  +KN+I E + + +K N+F
Sbjct: 171 LKILVEKYRHQKNFINESNVETVKFNLF 198


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -2

Query: 306 TRYVA-FTLVEFQYCKNVIMFRI 241
           T Y A FT+++F  CK +++  I
Sbjct: 72  TAYSAIFTVIDFSLCKAILVHAI 94


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 6/27 (22%), Positives = 15/27 (55%)
 Frame = -2

Query: 300 YVAFTLVEFQYCKNVIMFRIKNVYFDL 220
           YV+   + F +C  + +F +  +Y+ +
Sbjct: 137 YVSLLQLVFVFCYFIYLFTVYYIYYSV 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,198
Number of Sequences: 336
Number of extensions: 1601
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)