Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C05
         (406 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   2.4  
AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    23   3.2  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   7.4  

>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 4   CRNRHEASFYKRISFQRTACLVDCLELH*HFLLEVYYFLK 123
           C   H ASF  R +FQ+   +V+   ++     E+  FL+
Sbjct: 280 CDEAHYASFNVRTNFQKKLLMVELSWMNTDAQTEINMFLR 319


>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
           carrier protein TOL-2 protein.
          Length = 248

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 397 TETTQRALWSMKIPPLSTVRHYKIKTKLI 311
           TET      ++++P  S V  YKIK K++
Sbjct: 103 TETPNVMEMNLRLPVASLVGSYKIKGKVL 131


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 359 NLHGPQCSLRRL 394
           NLHGP+ S+ RL
Sbjct: 843 NLHGPRTSMSRL 854


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,378
Number of Sequences: 2352
Number of extensions: 6496
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)