Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C04
         (590 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   392   e-109
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   390   e-109
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   390   e-109
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   390   e-109
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   179   2e-45
BT022180-1|AAY51574.1|  413|Drosophila melanogaster IP01243p pro...    33   0.22 
AE014134-2691|AAF53516.2|  413|Drosophila melanogaster CG17328-P...    33   0.22 
AY058676-1|AAL13905.1|  577|Drosophila melanogaster LD38554p pro...    30   2.0  
AE013599-2062|AAF58134.1|  577|Drosophila melanogaster CG8180-PA...    30   2.0  
AE014298-1832|AAF48218.2|  418|Drosophila melanogaster CG12716-P...    29   6.2  

>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  392 bits (965), Expect = e-109
 Identities = 181/193 (93%), Positives = 188/193 (97%)
 Frame = +2

Query: 8   GRFVENTMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLV 187
           GR VE  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLV
Sbjct: 9   GRGVE--MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLV 66

Query: 188 SDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQT 367
           SDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQT
Sbjct: 67  SDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQT 126

Query: 368 GMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGF 547
           GMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGF
Sbjct: 127 GMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGF 186

Query: 548 TEYEREEFEKLRD 586
           T+YERE +E+LRD
Sbjct: 187 TKYERERYEELRD 199


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  390 bits (961), Expect = e-109
 Identities = 177/186 (95%), Positives = 184/186 (98%)
 Frame = +2

Query: 29  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 389 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTEYEREE 568
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFT+YERE 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 569 FEKLRD 586
           +E+LRD
Sbjct: 181 YEELRD 186


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  390 bits (961), Expect = e-109
 Identities = 177/186 (95%), Positives = 184/186 (98%)
 Frame = +2

Query: 29  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 389 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTEYEREE 568
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFT+YERE 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 569 FEKLRD 586
           +E+LRD
Sbjct: 181 YEELRD 186


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  390 bits (961), Expect = e-109
 Identities = 177/186 (95%), Positives = 184/186 (98%)
 Frame = +2

Query: 29  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 20  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 79

Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 388
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 80  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 139

Query: 389 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTEYEREE 568
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFT+YERE 
Sbjct: 140 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 199

Query: 569 FEKLRD 586
           +E+LRD
Sbjct: 200 YEELRD 205


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  179 bits (436), Expect = 2e-45
 Identities = 113/195 (57%), Positives = 126/195 (64%), Gaps = 2/195 (1%)
 Frame = +2

Query: 8   GRFVENTMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLV 187
           GR VE  MGRRPARCYRY           C+  P PK R F  G     +  F L     
Sbjct: 2   GRGVE--MGRRPARCYRY-----------CKNKPYPKSR-FCRGVPDPKIRIFDL----- 42

Query: 188 SDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRI--NKMLSCAGADRL 361
                      +E   +C   +LV     D++  ++        RI  NKMLSCAGADRL
Sbjct: 43  -----GRKKATVEDFPLCV--HLVS----DEYE-QLSSEALEAGRICCNKMLSCAGADRL 90

Query: 362 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKW 541
           QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKW
Sbjct: 91  QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKW 150

Query: 542 GFTEYEREEFEKLRD 586
           GFT+YERE +E+LRD
Sbjct: 151 GFTKYERERYEELRD 165


>BT022180-1|AAY51574.1|  413|Drosophila melanogaster IP01243p
           protein.
          Length = 413

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
 Frame = -2

Query: 436 HNGLSNTHTRYCALGFPER---TTHP-SLEPISSSARQHFIDADDMEGV*SHP 290
           H G+ N H   C   F  R    TH   L P+ SS     +D DD E + + P
Sbjct: 253 HTGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDDEAIDTDP 305


>AE014134-2691|AAF53516.2|  413|Drosophila melanogaster CG17328-PA
           protein.
          Length = 413

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
 Frame = -2

Query: 436 HNGLSNTHTRYCALGFPER---TTHP-SLEPISSSARQHFIDADDMEGV*SHP 290
           H G+ N H   C   F  R    TH   L P+ SS     +D DD E + + P
Sbjct: 253 HTGIKNHHCDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDDEAIDTDP 305


>AY058676-1|AAL13905.1|  577|Drosophila melanogaster LD38554p
           protein.
          Length = 577

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -2

Query: 391 FPERTTHPSLEPISSSARQHFIDADDME 308
           F +  +HP+ +P+ S+  +HFI++D  E
Sbjct: 61  FGDLLSHPTFKPLCSAQHEHFIESDGKE 88


>AE013599-2062|AAF58134.1|  577|Drosophila melanogaster CG8180-PA
           protein.
          Length = 577

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -2

Query: 391 FPERTTHPSLEPISSSARQHFIDADDME 308
           F +  +HP+ +P+ S+  +HFI++D  E
Sbjct: 61  FGDLLSHPTFKPLCSAQHEHFIESDGKE 88


>AE014298-1832|AAF48218.2|  418|Drosophila melanogaster CG12716-PA
           protein.
          Length = 418

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = -1

Query: 224 PAPQNSAARTHQTLSARIVGSHPLSLSFCPSRKYGSLGQAHPDKTEI*DTVYSYNIDNIS 45
           P P  S   T  T +AR+  + P S S  P R    +  A+P    +   + +YN+ NI 
Sbjct: 244 PRPFFSTTTTRITTTARMRPTKPTSTSPSPMRFQQLMNVANP-MVSVSQAIDAYNVYNIP 302

Query: 44  LVG 36
            VG
Sbjct: 303 DVG 305


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,838,610
Number of Sequences: 53049
Number of extensions: 664732
Number of successful extensions: 1796
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1796
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)