Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C03
         (402 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   7.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 200 LSLYLRVHAVFTRIVHCH 147
           L+ YLRV      +VHC+
Sbjct: 522 LAHYLRVFFTVFNVVHCY 539


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 367 SAILSPSTPSNL 402
           SA+LSP+ P NL
Sbjct: 127 SALLSPAMPHNL 138


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -2

Query: 329 DQLHRMLPLFASRVEEQLRESWT 261
           D + + LP+  +   + + E WT
Sbjct: 440 DYIRKYLPVLKNMPSQYIHEPWT 462


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,047
Number of Sequences: 336
Number of extensions: 2137
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)