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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C03
         (402 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)              62   1e-10
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)              61   3e-10
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)              60   7e-10
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)               60   7e-10
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   2e-07
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)               50   7e-07
SB_18389| Best HMM Match : Ferritin (HMM E-Value=2.8e-26)              40   0.001
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)               38   0.004
SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.46 
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.4  
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)         29   1.4  
SB_16785| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.4  
SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3)                     29   1.4  
SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)         29   1.4  
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)                29   1.4  
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)                29   1.4  
SB_23890| Best HMM Match : Oxidored_q4 (HMM E-Value=1)                 29   1.9  
SB_19831| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.9  
SB_45259| Best HMM Match : CH (HMM E-Value=0.00071)                    28   3.3  
SB_26997| Best HMM Match : WD40 (HMM E-Value=1.3e-08)                  28   3.3  
SB_43840| Best HMM Match : NDK (HMM E-Value=0)                         28   3.3  
SB_31035| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.3  
SB_57416| Best HMM Match : rve (HMM E-Value=0.0011)                    27   4.3  
SB_40777| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.3  
SB_28841| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.3  
SB_35800| Best HMM Match : 7tm_1 (HMM E-Value=3e-05)                   27   4.3  
SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)               27   5.7  
SB_58376| Best HMM Match : M20_dimer (HMM E-Value=0.00027)             27   5.7  
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.7  
SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   5.7  
SB_3591| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   7.6  
SB_21441| Best HMM Match : zf-A20 (HMM E-Value=2.2)                    26   10.0 
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   10.0 
SB_1830| Best HMM Match : DUF331 (HMM E-Value=3.5)                     26   10.0 
SB_57677| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   10.0 
SB_3090| Best HMM Match : No HMM Matches (HMM E-Value=.)               26   10.0 

>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 358

 Score = 62.5 bits (145), Expect = 1e-10
 Identities = 30/65 (46%), Positives = 39/65 (60%)
 Frame = +3

Query: 156 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 335
           H  C+  ++ QI  E+ AS  YL+M  HF RD +  PGF K F  A+ EEREHA KL+ +
Sbjct: 196 HEECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKF 255

Query: 336 LLMRG 350
              RG
Sbjct: 256 QNERG 260



 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 20/39 (51%), Positives = 24/39 (61%)
 Frame = +3

Query: 234 AHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLMRG 350
           AHF RD I+ PGFA  F  AA EE  HA   +++L  RG
Sbjct: 2   AHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRG 40


>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 304

 Score = 61.3 bits (142), Expect = 3e-10
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = +3

Query: 156 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 335
           H   +  ++ QI  E+ AS  Y++M  HF RD +  PGF K F +A+ EEREHA KL  +
Sbjct: 143 HEESEAGVNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKF 202

Query: 336 LLMRG 350
            L RG
Sbjct: 203 QLQRG 207


>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 289

 Score = 60.1 bits (139), Expect = 7e-10
 Identities = 29/65 (44%), Positives = 38/65 (58%)
 Frame = +3

Query: 156 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 335
           H   +  ++ QI  E+ AS  Y++M  HF RD +  PGF K F  A+ EEREHA KL  +
Sbjct: 128 HEESEAGVNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKF 187

Query: 336 LLMRG 350
            L RG
Sbjct: 188 QLQRG 192


>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 135

 Score = 60.1 bits (139), Expect = 7e-10
 Identities = 29/65 (44%), Positives = 38/65 (58%)
 Frame = +3

Query: 156 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 335
           H   +  ++ QI  E+ AS  Y++M  HF RD +  PGF K F  A+ EEREHA KL  +
Sbjct: 11  HEESEAGVNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKF 70

Query: 336 LLMRG 350
            L RG
Sbjct: 71  QLQRG 75


>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 394

 Score = 52.0 bits (119), Expect = 2e-07
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = +3

Query: 156 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMK 323
           H  C+  ++ QI  E+ AS  Y +M  +F R+ ++ PGF K F   A EEREHA K
Sbjct: 9   HEECEAGINKQINLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHAEK 64


>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
          Length = 126

 Score = 50.0 bits (114), Expect = 7e-07
 Identities = 25/53 (47%), Positives = 31/53 (58%)
 Frame = +3

Query: 159 NPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHA 317
           N  +  ++ QI  E+ A   YL+M  HF RD IN PGF K F  A+ EE EHA
Sbjct: 32  NQLEGPINKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84


>SB_18389| Best HMM Match : Ferritin (HMM E-Value=2.8e-26)
          Length = 175

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 21/67 (31%), Positives = 34/67 (50%)
 Frame = +3

Query: 150 TMHNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLI 329
           ++H   +  ++ Q + E DAS +YLAM A   R+       A   +  + EEREH +K+ 
Sbjct: 10  SLHESVEKLLNLQSKIESDASTKYLAMAAWLDRNGFENT--AGYMYKQSEEEREHFLKVF 67

Query: 330 DYLLMRG 350
            Y+   G
Sbjct: 68  KYITEMG 74


>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 203

 Score = 37.5 bits (83), Expect = 0.004
 Identities = 17/27 (62%), Positives = 18/27 (66%)
 Frame = +3

Query: 237 HFSRDVINRPGFAKLFFDAASEEREHA 317
           HF RD IN PGF K F  A+ EE EHA
Sbjct: 32  HFDRDDINLPGFNKFFKKASKEEWEHA 58


>SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2141

 Score = 30.7 bits (66), Expect = 0.46
 Identities = 20/79 (25%), Positives = 30/79 (37%)
 Frame = -2

Query: 344 HEQVVDQLHRMLPLFASRVEEQLRESWTIDHVTGEMGTHCQILYGRVHLSLYLRVHAVFT 165
           H  +V   H+ L + A   +     +WT  H+T    TH        HL++  R H   T
Sbjct: 401 HLTIVTWTHKHLTIVAWTHKHLTIVTWTHKHLTSGTWTH-------KHLTIVTRTHKHLT 453

Query: 164 RIVHCHPFGGYICWVHVTL 108
            +   H     + W H  L
Sbjct: 454 IVTRTHKHLTIVTWTHKDL 472


>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1379

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 237 HFSRDVINRPGFAKLFFDAASE 302
           HF+   IN+PG  ++ FDAASE
Sbjct: 350 HFAVTNINKPGKLRIIFDAASE 371


>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
          Length = 1740

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 237 HFSRDVINRPGFAKLFFDAASE 302
           HF+   IN+PG  ++ FDAASE
Sbjct: 868 HFAVTNINKPGKLRIIFDAASE 889


>SB_16785| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 235

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = -2

Query: 254 HVTGEMGTHCQILYGRVHLSLYLRVHAVFTRIVHCHPFGGYICWVHVTLYSDSRRRDSQG 75
           HVTG+  +   +  G        R+H       H H  GG +  +HVT   DSR   + G
Sbjct: 58  HVTGDDDSRIHVTGGDDS-----RIHVTGGDDSHIHVTGGDVSRIHVTGGDDSRIHVTGG 112

Query: 74  TDDCK 60
            DD +
Sbjct: 113 GDDSR 117


>SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3)
          Length = 249

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 237 HFSRDVINRPGFAKLFFDAASE 302
           HF+   IN+PG  ++ FDAASE
Sbjct: 30  HFAVTNINKPGKLRIIFDAASE 51


>SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)
          Length = 475

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 237 HFSRDVINRPGFAKLFFDAASE 302
           HF+   IN+PG  ++ FDAASE
Sbjct: 151 HFAVTNINKPGKLRIIFDAASE 172


>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
          Length = 1244

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 237 HFSRDVINRPGFAKLFFDAASE 302
           HF+   IN+PG  ++ FDAASE
Sbjct: 667 HFAVTNINKPGKLRIIFDAASE 688


>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1515

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 237  HFSRDVINRPGFAKLFFDAASE 302
            HF+   IN+PG  ++ FDAASE
Sbjct: 945  HFAVTNINKPGKLRIIFDAASE 966


>SB_23890| Best HMM Match : Oxidored_q4 (HMM E-Value=1)
          Length = 317

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 51  ALFLAIVGTLAVSTPAIAIQCHVNPANVSSE 143
           A+ +A+   +A++   I ++CH+NP N + E
Sbjct: 202 AMAMAMAMAMAMAIIMIVVRCHINPRNKTDE 232


>SB_19831| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 141

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +2

Query: 233 CPFLP*RDQSSRIREAVLRRG*RREGACDEADRLLA 340
           CP LP      R+R  VLR G   E  C  A   LA
Sbjct: 26  CPLLPSTSSPHRVRFRVLRNGDPLESTCRHASLALA 61


>SB_45259| Best HMM Match : CH (HMM E-Value=0.00071)
          Length = 1032

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 162 PCKDSMHAQIQT-EVDASVQYLAMGAHFSRDVINR 263
           PC  S+H  +   + D  VQ +A+  HFS+DV  R
Sbjct: 360 PCT-SLHLYLPARDFDHEVQSIAISGHFSKDVTER 393


>SB_26997| Best HMM Match : WD40 (HMM E-Value=1.3e-08)
          Length = 175

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 193 CICACMLSLQGLCIVTHSED 134
           C C  M   QG C+VT SED
Sbjct: 98  CFCPLMSFRQGACVVTGSED 117


>SB_43840| Best HMM Match : NDK (HMM E-Value=0)
          Length = 786

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +2

Query: 116 REPSKCILRMGDNA---QSL*RQHARANTN*GGRVRTISGNGCPFL 244
           ++ SKC+ R  +      ++ R  +  + + GGR R+ +GN  PFL
Sbjct: 42  KDKSKCLFRCSNGVLRNTAIRRVFSSQSGSSGGRSRSFAGNAAPFL 87


>SB_31035| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 282

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 207 RPPQFVFARACCLYKDCALSPI 142
           R P+FV  R C L+  C L PI
Sbjct: 19  RRPRFVALRQCSLFNSCPLPPI 40


>SB_57416| Best HMM Match : rve (HMM E-Value=0.0011)
          Length = 807

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 237 HFSRDVINRPGFAKLFFDAASEEREHAM 320
           HF     N+PG  ++ FDAA++ R +++
Sbjct: 138 HFGVTSANKPGCVRIVFDAAAKTRTNSL 165


>SB_40777| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 308

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -3

Query: 214 TDASTSVCI---CACMLSLQGLCIVTHSEDTFAGFT*HCIAIAGV 89
           +D +  VCI   C+ +++LQGL ++         F+  CI  AG+
Sbjct: 69  SDLAVGVCIQPLCSAVMALQGLGVMAKHCTLVGAFSVLCIYFAGI 113


>SB_28841| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 400

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 359 HKLSPHEQVVDQLHRMLPLFASRVEEQLRESWTIDH 252
           H L+ H+Q   ++  M+P   SRV E  R+  ++ H
Sbjct: 3   HLLATHQQFDQEVPHMIPQLQSRVLETRRKLTSLQH 38


>SB_35800| Best HMM Match : 7tm_1 (HMM E-Value=3e-05)
          Length = 301

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = -2

Query: 230 HCQILYGRVHLSLYLRVHAVFTRIVHCHPFGGY---IC--WVHVTLYSDSRRRDS 81
           HC +   RVH  +Y+RV   F    + + +G Y   +C  W H    SD+  R++
Sbjct: 177 HCSVRGDRVHGGVYVRVARPF-NASYLYRYGRYATLLCATWPHKLYVSDNNGRNT 230


>SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)
          Length = 73

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 291 AASEEREHAMKLIDYLLMRG 350
           A+ EEREHA KL  + L RG
Sbjct: 3   ASHEEREHAEKLAKFQLQRG 22


>SB_58376| Best HMM Match : M20_dimer (HMM E-Value=0.00027)
          Length = 517

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -2

Query: 296 SRVEEQLRESWTIDHVTGEMGTHCQILYGRVHLSLYLR 183
           S + +Q++ +W +  +  E G    I+  +  L +YLR
Sbjct: 326 SAMRQQMKPTWRVHSIIAEGGVKPNIIPDKTKLEIYLR 363


>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6406

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 266  RIREAVLRRG*RREGACDEADRLLAHEGRAY 358
            R  EA++ +G   EGACDE  R L    RA+
Sbjct: 3621 RALEAIISQGDAFEGACDEFLRWLTKTERAH 3651


>SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1228

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 69  VGTLAVSTPAIAIQCHVNPANVSSEWVTMHNPCKDSMHAQIQTEVDAS 212
           V TL+   PA+A+   +N AN  S   T+ +P     H Q+  E + +
Sbjct: 91  VKTLSPDIPALALYPSLNIANKQSLHRTLSDPGSPPGHTQVCQETEVA 138


>SB_3591| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1585

 Score = 26.6 bits (56), Expect = 7.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 326 QLHRMLPLFASRVEEQLRESWTIDHVTGEMGTH 228
           Q+H  LP++A RV   L   W + H T  +  H
Sbjct: 141 QMHSSLPVWAIRVIRALLSLWQLQHRTECLKQH 173


>SB_21441| Best HMM Match : zf-A20 (HMM E-Value=2.2)
          Length = 308

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 56  ISCNRRYPGCLYACYRYTMSREPSK 130
           ++C+R   G    C RYT+ RE SK
Sbjct: 211 VTCSRGSQGPGAGCVRYTIGRESSK 235


>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 549

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -2

Query: 326 QLHRMLPLFASRVEEQLRESWTIDHVTGEMGTHCQILYGRVH 201
           ++H+ L      VEE  R+   +D     M  +CQ+   R+H
Sbjct: 93  EIHKALEKGKPVVEEMTRKIRKLDTYLDSMSVNCQLTEERIH 134


>SB_1830| Best HMM Match : DUF331 (HMM E-Value=3.5)
          Length = 326

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 125 WVHVTLYSDSRRRDSQGTD 69
           W+H  LYSD R R++ G +
Sbjct: 116 WMHSELYSDKRPRNTHGCE 134


>SB_57677| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 359

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -2

Query: 383 GDKIADVRHKLSPHEQVVDQLHRMLPLFASRVEEQLRESWTIDHVTGEM 237
           GD+++ +    S  E      +R LP+  S+V+    E + I H  GEM
Sbjct: 242 GDQLSVLSQSDSESEHNRRYEYRSLPIIKSQVKRTNSEPFNIAHNVGEM 290


>SB_3090| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 358

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 176 AVFTRIVHCHPFGGYICWVHVTLYSDSRRRDSQGTDDCKK 57
           AV  ++   HP    + +++  + +DS+ R S   DDC K
Sbjct: 224 AVKNQVKLTHPDSPELAFLYGVIITDSKDRYSDDPDDCTK 263


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,349,171
Number of Sequences: 59808
Number of extensions: 295775
Number of successful extensions: 893
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 715479706
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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