Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_C03
(402 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin prot... 51 3e-07
AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 51 4e-07
Z68215-16|CAD59144.1| 458|Caenorhabditis elegans Hypothetical p... 30 0.71
Z68160-5|CAA92293.2| 458|Caenorhabditis elegans Hypothetical pr... 30 0.71
U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical pr... 30 0.71
U41038-2|AAX88827.1| 635|Caenorhabditis elegans Serotonin/octop... 28 2.9
U41038-1|AAK29709.2| 683|Caenorhabditis elegans Serotonin/octop... 28 2.9
AF078157-12|AAG24073.1| 338|Caenorhabditis elegans Hypothetical... 28 2.9
AF031415-1|AAC15778.1| 635|Caenorhabditis elegans serotonin rec... 28 2.9
AF031414-1|AAC15827.1| 683|Caenorhabditis elegans serotonin rec... 28 2.9
U41273-1|AAA82453.1| 516|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z81531-1|CAB04314.2| 436|Caenorhabditis elegans Hypothetical pr... 27 5.0
U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical pr... 27 5.0
U88178-3|AAC24414.1| 305|Caenorhabditis elegans Yeast glc seven... 26 8.8
U88169-1|AAB42233.1| 305|Caenorhabditis elegans Yeast glc seven... 26 8.8
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 26 8.8
AF099919-9|AAC68799.1| 229|Caenorhabditis elegans Helix loop he... 26 8.8
>AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin protein
2 protein.
Length = 170
Score = 51.2 bits (117), Expect = 3e-07
Identities = 25/65 (38%), Positives = 39/65 (60%)
Frame = +3
Query: 156 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 335
H+ + +++ QI E+ AS YL+M +F RD + P AK F + + EEREHA +L+
Sbjct: 9 HSEVEAAVNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHATELMRV 68
Query: 336 LLMRG 350
+RG
Sbjct: 69 QNLRG 73
>AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin
protein 1 protein.
Length = 170
Score = 50.8 bits (116), Expect = 4e-07
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +3
Query: 156 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 335
H+ + +++ QI E+ AS YL+M AHF RD I AK F + + EER HA +L+
Sbjct: 9 HDEVEAAVNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHATELMRI 68
Query: 336 LLMRG 350
+RG
Sbjct: 69 QAVRG 73
>Z68215-16|CAD59144.1| 458|Caenorhabditis elegans Hypothetical
protein D1046.5 protein.
Length = 458
Score = 29.9 bits (64), Expect = 0.71
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 48 KALFLAIVGTLAVSTPAIAIQCHVNPANVSSEWVTM 155
K++ +A++GTL VS P A+Q + + + W+ +
Sbjct: 179 KSILIALLGTLLVSIPHTAVQVIIEMKIIDNSWLPL 214
>Z68160-5|CAA92293.2| 458|Caenorhabditis elegans Hypothetical
protein D1046.5 protein.
Length = 458
Score = 29.9 bits (64), Expect = 0.71
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 48 KALFLAIVGTLAVSTPAIAIQCHVNPANVSSEWVTM 155
K++ +A++GTL VS P A+Q + + + W+ +
Sbjct: 179 KSILIALLGTLLVSIPHTAVQVIIEMKIIDNSWLPL 214
>U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical
protein F09F7.3 protein.
Length = 1154
Score = 29.9 bits (64), Expect = 0.71
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +3
Query: 105 IQCHV---NPANVSSEWVTMHNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFA 275
+QC V S +VTM H Q+ +V S+ + AMG D+++ G
Sbjct: 202 LQCEVLSSTSERKSKTYVTMKKGKYSVRHNQLTDDVPVSIIFKAMGVESDFDIVSTIGHE 261
Query: 276 KLFFDAASEEREHAMKLIDYLLMRGELMSDVSDLITVNTFEP 401
+ + A ++ E ++ Y + + ++ V+ + F P
Sbjct: 262 EKYVSAFAQTLEESINAGVY--TQQQALAYVTSKVKARKFTP 301
>U41038-2|AAX88827.1| 635|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 1, isoform b
protein.
Length = 635
Score = 27.9 bits (59), Expect = 2.9
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 123 PANVSSEWVTMHNPCKDSMHAQIQTEV-DASVQYLAMGAHFSRDVINRPGFAKLFFDAAS 299
PA V + + NP K S+ I + D ++ A H S+ ++ F
Sbjct: 515 PATVINIPEQLINPIKKSLTTIINMPLLDETIPEKAQVHHKSQTLLTSSTLNFATFSTCP 574
Query: 300 EEREHAMKLIDYLLMRGELMSDVSDLITVNT 392
++ + +D L SDVSD++T +T
Sbjct: 575 QQPTRSYSCVDCKKAEKMLSSDVSDMMTTST 605
>U41038-1|AAK29709.2| 683|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 1, isoform a
protein.
Length = 683
Score = 27.9 bits (59), Expect = 2.9
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 123 PANVSSEWVTMHNPCKDSMHAQIQTEV-DASVQYLAMGAHFSRDVINRPGFAKLFFDAAS 299
PA V + + NP K S+ I + D ++ A H S+ ++ F
Sbjct: 563 PATVINIPEQLINPIKKSLTTIINMPLLDETIPEKAQVHHKSQTLLTSSTLNFATFSTCP 622
Query: 300 EEREHAMKLIDYLLMRGELMSDVSDLITVNT 392
++ + +D L SDVSD++T +T
Sbjct: 623 QQPTRSYSCVDCKKAEKMLSSDVSDMMTTST 653
>AF078157-12|AAG24073.1| 338|Caenorhabditis elegans Hypothetical
protein F25E5.2 protein.
Length = 338
Score = 27.9 bits (59), Expect = 2.9
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 156 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 335
H+P + + +T V HF+RD +N+ F K F + E+ + +D
Sbjct: 220 HSPLAEGLEGNYRTYVTHHFSPQTWNCHFNRD-LNKIQFLK--FGGSKEDLAKFLTDLDK 276
Query: 336 LLMRGELMSDVSDLIT 383
+L + +DV +IT
Sbjct: 277 ILGEQGVEADVRSVIT 292
>AF031415-1|AAC15778.1| 635|Caenorhabditis elegans serotonin
receptor protein.
Length = 635
Score = 27.9 bits (59), Expect = 2.9
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 123 PANVSSEWVTMHNPCKDSMHAQIQTEV-DASVQYLAMGAHFSRDVINRPGFAKLFFDAAS 299
PA V + + NP K S+ I + D ++ A H S+ ++ F
Sbjct: 515 PATVINIPEQLINPIKKSLTTIINMPLLDETIPEKAQVHHKSQTLLTSSTLNFATFSTCP 574
Query: 300 EEREHAMKLIDYLLMRGELMSDVSDLITVNT 392
++ + +D L SDVSD++T +T
Sbjct: 575 QQPTRSYSCVDCKKAEKMLSSDVSDMMTTST 605
>AF031414-1|AAC15827.1| 683|Caenorhabditis elegans serotonin
receptor protein.
Length = 683
Score = 27.9 bits (59), Expect = 2.9
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 123 PANVSSEWVTMHNPCKDSMHAQIQTEV-DASVQYLAMGAHFSRDVINRPGFAKLFFDAAS 299
PA V + + NP K S+ I + D ++ A H S+ ++ F
Sbjct: 563 PATVINIPEQLINPIKKSLTTIINMPLLDETIPEKAQVHHKSQTLLTSSTLNFATFSTCP 622
Query: 300 EEREHAMKLIDYLLMRGELMSDVSDLITVNT 392
++ + +D L SDVSD++T +T
Sbjct: 623 QQPTRSYSCVDCKKAEKMLSSDVSDMMTTST 653
>U41273-1|AAA82453.1| 516|Caenorhabditis elegans Hypothetical
protein C26B9.5 protein.
Length = 516
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 2 HEAIVKVSCDFNYKNEGFISCNRRYPGCLYACYR 103
H I +++ FN++N +I+ YPG L A +R
Sbjct: 161 HNFIQQMNRRFNFQNPKWITFGGSYPGTLSALFR 194
>Z81531-1|CAB04314.2| 436|Caenorhabditis elegans Hypothetical
protein F36D3.1 protein.
Length = 436
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -3
Query: 301 SLAASKNSFANPGRLITSREK--WAPIARYCTDASTSVCICACMLSLQGLCIVTHS 140
++A + N+FA P + W+P ++ D + C L G CI T++
Sbjct: 73 TVATTPNAFALPQEIGEKYADAVWSPYLKFVKDDENDIFTSGCRGGLLGECIFTYA 128
>U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical
protein ZK328.6 protein.
Length = 394
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 57 FLAIVGTLAVSTPAIAIQCHVNP 125
FLAI GTL + +Q HVNP
Sbjct: 147 FLAIEGTLFSELQQLTLQVHVNP 169
>U88178-3|AAC24414.1| 305|Caenorhabditis elegans Yeast glc
seven-like phosphatasesprotein 3 protein.
Length = 305
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 392 GVDGDKIADVRHKLSPHEQVVDQLHRMLP 306
G+ G +I + LSPH Q +DQL R LP
Sbjct: 162 GLIGSRILCMHGGLSPHLQTLDQL-RQLP 189
>U88169-1|AAB42233.1| 305|Caenorhabditis elegans Yeast glc
seven-like phosphatasesprotein 4 protein.
Length = 305
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 392 GVDGDKIADVRHKLSPHEQVVDQLHRMLP 306
G+ G +I + LSPH Q +DQL R LP
Sbjct: 162 GLIGSRILCMHGGLSPHLQTLDQL-RQLP 189
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 256 ITSREKWAPIA-RYCTDASTSVCICACMLSLQGLCI 152
+T ++ P+ + C A TSVC+ CM CI
Sbjct: 63 VTCPDRCQPMCTQACVMAKTSVCVDQCMPKCDSACI 98
>AF099919-9|AAC68799.1| 229|Caenorhabditis elegans Helix loop helix
protein 21 protein.
Length = 229
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 314 MLPLFASRVEEQLRESWTIDHVT 246
M+P S VE L +S IDHVT
Sbjct: 149 MVPFVTSSVENHLLKSTEIDHVT 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,628,195
Number of Sequences: 27780
Number of extensions: 204891
Number of successful extensions: 544
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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