BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0002_C02 (419 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 104 3e-23 06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 44 7e-05 06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 44 7e-05 03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 44 7e-05 02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 44 7e-05 06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 42 2e-04 10_08_0620 - 19321612-19323237 37 0.008 02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 36 0.010 04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 35 0.031 05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 34 0.040 12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 28 2.7 12_02_0648 + 21490202-21490296,21490547-21490634,21491216-214912... 28 3.5 04_04_0200 - 23529497-23531938,23532586-23533720,23534272-235344... 27 4.6 07_03_0297 - 16383159-16383626 27 8.1 04_04_0929 - 29474540-29475247,29475485-29475850,29476032-294760... 27 8.1 >03_06_0362 + 33379489-33379624,33380161-33380423,33380524-33380670, 33380753-33380914,33381681-33381758,33382329-33382462, 33382702-33382774,33382852-33382929,33383002-33383124, 33383223-33383317,33383723-33383932,33384115-33384172, 33384268-33384333 Length = 540 Score = 104 bits (250), Expect = 3e-23 Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 3/141 (2%) Frame = +2 Query: 2 PRAKLMVLASQMQDSEVGDGTNFVIVXXXXXXXXXXXXXXXXVTTSEIADGYERALDKCL 181 P AK++VLA + Q E+GDG N I + SEI GY +A++K + Sbjct: 76 PAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTV 135 Query: 182 ELLPGLV--CSEVKDVKDIQEVTKAIRPAIMSKQYGNEDFIAELVAKACVGILPEK-TTF 352 E+L LV SE DV++ +EV +R A+ SKQ+G ED + LVA AC+ + P+ F Sbjct: 136 EILEDLVEKGSENMDVRNKEEVVLLMRSAVASKQFGQEDILCPLVADACMQVCPKNPANF 195 Query: 353 NVDNVRICQILGAGLLQSEVL 415 NVDNVR+ ++LG GL S V+ Sbjct: 196 NVDNVRVAKLLGGGLHNSSVV 216 >06_03_1193 - 28298656-28298754,28299303-28299377,28299456-28299544, 28299679-28299760,28300385-28300474,28300557-28300655, 28300733-28300852,28300968-28301084,28301174-28301309, 28301415-28301584,28301744-28301947,28302032-28302157, 28302841-28303101,28303215-28303229 Length = 560 Score = 43.6 bits (98), Expect = 7e-05 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 3/113 (2%) Frame = +2 Query: 2 PRAKLMVLASQMQDSEVGDGTNFVIVXXXXXXXXXXXXXXXXVTTSEIADGYERALDKCL 181 P AK++V ++ QDSEVGDGT V++ V + Y A + Sbjct: 77 PAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSYRTAGHLAI 136 Query: 182 ELLPGLVCS-EVKDVKDIQE-VTKAIRPAIMSKQYGNE-DFIAELVAKACVGI 331 E + L S E K +++ +E + K + SK G E +F A +V A + I Sbjct: 137 EKVKDLATSIEGKSLEEKKELLAKCAATTLSSKLIGGEKEFFASMVVDAVLAI 189 >06_03_0477 - 21250811-21250981,21251261-21251374,21251447-21251613, 21252051-21252153,21252315-21252367,21252438-21252570, 21252835-21253183,21253685-21254003,21254519-21254717 Length = 535 Score = 43.6 bits (98), Expect = 7e-05 Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 2/138 (1%) Frame = +2 Query: 8 AKLMVLASQMQDSEVGDGTNFVIVXXXXXXXXXXXXXXXXVTTSEIADGYERALDKCLEL 187 AKLMV S QD E+GDGT V+V + IA+GYE A + Sbjct: 84 AKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDH 143 Query: 188 LPGLVCSEVKDVKDIQEVTKAIRPAIMSKQYGN-EDFIAELVAKACVGILP-EKTTFNVD 361 L + +I+ + + + SK + +AE+ KA + + E+ N+D Sbjct: 144 LEHISHKFEFSATNIEPLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLD 203 Query: 362 NVRICQILGAGLLQSEVL 415 +++ +G L +E++ Sbjct: 204 LIKVEGKVGGKLEDTELV 221 >03_05_0339 + 23287620-23287676,23287784-23287849,23287937-23288048, 23288240-23288368,23288795-23288866,23289245-23289360, 23289494-23289570,23289788-23290273,23290373-23290688, 23290769-23290915 Length = 525 Score = 43.6 bits (98), Expect = 7e-05 Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 2/137 (1%) Frame = +2 Query: 2 PRAKLMVLASQMQDSEVGDGTNFVIVXXXXXXXXXXXXXXXXVTTSEIADGYERALDKCL 181 P AK++V S++QD EVGDGT V+V + I GY A++ Sbjct: 72 PAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGYRMAVECAR 131 Query: 182 ELLPGLVCSEVKDVKDIQEVTKAIRPAIMSKQYGNED--FIAELVAKACVGILPEKTTFN 355 L +++ + I +S + ++D + AEL A +L K + N Sbjct: 132 NALLERTMDNKENIDKFRSDLMNIAMTTLSSKILSQDKEYFAELAVDA---VLRLKGSTN 188 Query: 356 VDNVRICQILGAGLLQS 406 ++ ++I +I G L S Sbjct: 189 LEAIQILKIPGGSLKDS 205 >02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037, 8326249-8326374,8326451-8326835,8326931-8327208, 8327294-8327367,8327476-8327547,8327637-8327705, 8340132-8340201,8340806-8340873,8341571-8341643, 8341807-8341868,8342168-8342198 Length = 559 Score = 43.6 bits (98), Expect = 7e-05 Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 1/107 (0%) Frame = +2 Query: 2 PRAKLMVLASQMQDSEVGDGTNFVIVXXXXXXXXXXXXXXXXVTTSEIADGYERALDKCL 181 P AK M+ S+ QD EVGDGT VIV + I Y +ALD L Sbjct: 75 PAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDAL 134 Query: 182 ELLPGLVCSEVKDVKDIQEVTKAIRPAIMSKQYGN-EDFIAELVAKA 319 +L + DV D + ++ +I +K G D IA+L A Sbjct: 135 SVLDKIAIP--VDVDDRVAMLGLVKSSIGTKFTGQFGDLIADLAIDA 179 >06_03_0353 + 19810945-19810975,19811308-19811369,19811741-19811813, 19813292-19813359,19813496-19813565,19813908-19813976, 19814065-19814136,19814247-19814320,19814420-19814697, 19814804-19815188,19815268-19815393,19815583-19815687, 19815986-19815994,19817040-19817114,19817202-19817390 Length = 561 Score = 42.3 bits (95), Expect = 2e-04 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 1/107 (0%) Frame = +2 Query: 2 PRAKLMVLASQMQDSEVGDGTNFVIVXXXXXXXXXXXXXXXXVTTSEIADGYERALDKCL 181 P AK M+ S+ QD EVGDGT VIV + I Y +AL+ L Sbjct: 75 PAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAYTKALEDAL 134 Query: 182 ELLPGLVCSEVKDVKDIQEVTKAIRPAIMSKQYGN-EDFIAELVAKA 319 +L + DV D + ++ +I +K G D IA+L A Sbjct: 135 AVLDKIAMH--VDVNDRAAMLGLVKSSIGTKFTGQFGDLIADLAIDA 179 >10_08_0620 - 19321612-19323237 Length = 541 Score = 36.7 bits (81), Expect = 0.008 Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 3/141 (2%) Frame = +2 Query: 2 PRAKLMVLASQMQDSEVGDGTNFVIVXXXXXXXXXXXXXXXXVTTSEIADGYERALDKCL 181 P A+++ S+ QD+ GDGT V+V + AD + + Sbjct: 84 PAARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAV 143 Query: 182 ELLPGLVCSEVKDVKDIQEVTKAIRPAIMSKQYGN-EDFIAELVAKACVGILPEKTTFNV 358 E+L G+ ++ D + K+ A+ SK ++ L A + ++ + + Sbjct: 144 EVLHGMAIP--VELSDRDALVKSASTALNSKVVSQYSTLLSPLAVDAALAVVDPAHPYLL 201 Query: 359 D--NVRICQILGAGLLQSEVL 415 D ++R+ + LG + +E++ Sbjct: 202 DLRDIRVVKKLGCTVDDTELI 222 >02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 Length = 550 Score = 36.3 bits (80), Expect = 0.010 Identities = 27/141 (19%), Positives = 58/141 (41%), Gaps = 3/141 (2%) Frame = +2 Query: 2 PRAKLMVLASQMQDSEVGDGTNFVIVXXXXXXXXXXXXXXXXVTTSEIADGYERALDKCL 181 P A+++ S+ QD+ GDGT V+V + AD R + + Sbjct: 80 PAARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAV 139 Query: 182 ELLPGLVCSEVKDVKDIQEVTKAIRPAIMSKQYGN-EDFIAELVAKACVGIL--PEKTTF 352 E+L + ++ D + K+ A+ SK ++ L A + ++ Sbjct: 140 EVLHAMAIP--IELSDRDSLVKSASTALNSKVVSQYSSLLSPLAVDAALSVVDPAHPDLL 197 Query: 353 NVDNVRICQILGAGLLQSEVL 415 ++ ++R+ + LG + +E++ Sbjct: 198 DLRDIRVVKKLGGTVDDTELI 218 >04_04_0729 + 27612106-27612195,27612284-27612370,27612469-27612528, 27612554-27612688,27612769-27612864,27613149-27613214, 27613647-27613864,27614093-27614189,27614605-27614691, 27614892-27615026,27615121-27615225,27615717-27615845, 27615925-27616028,27616598-27616688,27616774-27616857 Length = 527 Score = 34.7 bits (76), Expect = 0.031 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +2 Query: 2 PRAKLMVLASQMQDSEVGDGTNFVIVXXXXXXXXXXXXXXXXVTTSEIADGY 157 P AK++V +++QD EVGDGT V++ + + I GY Sbjct: 27 PAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVRNKIHPTSIISGY 78 >05_07_0067 + 27463703-27463705,27464309-27464365,27464779-27464844, 27464985-27465096,27465281-27465409,27466076-27466191, 27466364-27466440,27466678-27467163,27467255-27467570, 27467618-27467797 Length = 513 Score = 34.3 bits (75), Expect = 0.040 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +2 Query: 2 PRAKLMVLASQMQDSEVGDGTNFVIV 79 P AK++V S++QD EVGDGT V+V Sbjct: 73 PAAKVLVDISKVQDDEVGDGTTSVVV 98 >12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999, 3515033-3517110,3517649-3517976,3519136-3519255, 3519299-3519352,3520115-3520154,3520344-3520411 Length = 1088 Score = 28.3 bits (60), Expect = 2.7 Identities = 16/70 (22%), Positives = 37/70 (52%) Frame = +2 Query: 161 RALDKCLELLPGLVCSEVKDVKDIQEVTKAIRPAIMSKQYGNEDFIAELVAKACVGILPE 340 R++ E + +CS +V ++++ KA+ + ++ +ED A+L AK + Sbjct: 763 RSVQTVKESMEAQLCSSNTEVLKLRDIVKALENEVEKEKALHEDLSAQLEAK-----IEA 817 Query: 341 KTTFNVDNVR 370 + TF+V+ ++ Sbjct: 818 ERTFSVEAIK 827 >12_02_0648 + 21490202-21490296,21490547-21490634,21491216-21491260, 21491355-21491387,21491480-21491557,21491647-21491690, 21491765-21491805,21492102-21492184,21492261-21492352, 21492468-21492537,21492838-21492876,21493670-21493687, 21494586-21494713,21495235-21495358,21495585-21495716, 21496092-21496223,21496582-21496665 Length = 441 Score = 27.9 bits (59), Expect = 3.5 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +1 Query: 283 K*RFYC*TCSKGMCRYLA*ENYFQCR*C 366 K +F+C C G+CR ENYF C C Sbjct: 116 KGQFHCYDC--GICRVGGKENYFHCAKC 141 >04_04_0200 - 23529497-23531938,23532586-23533720,23534272-23534463, 23535527-23535570 Length = 1270 Score = 27.5 bits (58), Expect = 4.6 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -3 Query: 135 VVTPNWSSSSADSNRAPERTMTKLV 61 V P+W S + DS+R P KLV Sbjct: 225 VAVPSWRSKNLDSSREPSEKKCKLV 249 >07_03_0297 - 16383159-16383626 Length = 155 Score = 26.6 bits (56), Expect = 8.1 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 Query: 152 GYERALDKCLELLPGLVCSEVKDVKDIQEVTKAIR 256 GY AL CL+ G + + +VK +E +AIR Sbjct: 21 GYANALSLCLQRKDGGILEAMLEVKSTKEKFQAIR 55 >04_04_0929 - 29474540-29475247,29475485-29475850,29476032-29476093, 29476191-29476302,29476401-29476529,29476724-29476738 Length = 463 Score = 26.6 bits (56), Expect = 8.1 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = -3 Query: 141 SLVVTPNWSSSSADSNRAPERTMTKLVPSPTSESCI 34 S+ T +S + +S R R ++VPSP S C+ Sbjct: 386 SVPETATHNSETTESYRNGNRNEDEMVPSPDSRKCV 421 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,911,210 Number of Sequences: 37544 Number of extensions: 139694 Number of successful extensions: 408 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 403 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 405 length of database: 14,793,348 effective HSP length: 75 effective length of database: 11,977,548 effective search space used: 766563072 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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