Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C02
         (419 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.5  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    21   7.5  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    21   7.5  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   7.5  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +2

Query: 176 CLEL-LPGLVCSEVKDVKDIQEVT 244
           CL+  LP L     KD+K  +E+T
Sbjct: 595 CLDPNLPKLALFATKDIKQNEEIT 618


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 149 DGYERALDKCLELL 190
           DGY+  LDK  ELL
Sbjct: 162 DGYQNILDKKDELL 175


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 149 DGYERALDKCLELL 190
           DGY+  LDK  ELL
Sbjct: 162 DGYQNILDKKDELL 175


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 149 DGYERALDKCLELL 190
           DGY+  LDK  ELL
Sbjct: 162 DGYQNILDKKDELL 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,650
Number of Sequences: 438
Number of extensions: 1593
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)