Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_C01
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   1.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   5.6  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 452 NSLEDVSSSAALIQQSTTVKNKDIRKFLDGLY 547
           N+L    S+ AL+      K+  I++FL G+Y
Sbjct: 94  NTLNTCRSALALLLSPEVGKDHRIKRFLRGVY 125


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -3

Query: 252 LIMFST*EHTVLTAASSFLE---PNHFSTFNWRGLTMRMSTAKCLKF 121
           L+MFS  ++ V +  + +L    PN ++ F  +  T +    KC+K+
Sbjct: 11  LLMFSYTDN-VSSTRTKYLRTNFPNFYNDFEVQRYTWKCENQKCVKY 56


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 423 LGELTTVTPGAIFTLLMYFSPRKLRISIIVF 331
           L    ++TP   F   +  SPR  +IS I F
Sbjct: 19  LSHFLSITPNYDFENFVIISPRCDKISAICF 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,093
Number of Sequences: 336
Number of extensions: 2856
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)