Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_C01
(566 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 26 0.23
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 2.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 2.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 2.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 2.1
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 3.7
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 4.9
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 22 4.9
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 6.5
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 26.2 bits (55), Expect = 0.23
Identities = 22/74 (29%), Positives = 27/74 (36%)
Frame = +1
Query: 43 EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 222
E S + C+ + S S RS Q HS S E G R SC D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDGNSYRNDGERSCSRD 256
Query: 223 SMLSCRKHDQRCDQ 264
+K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.1
Identities = 21/74 (28%), Positives = 26/74 (35%)
Frame = +1
Query: 43 EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 222
E S + C+ + S S RS Q HS S E R SC D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRD 256
Query: 223 SMLSCRKHDQRCDQ 264
+K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.1
Identities = 21/74 (28%), Positives = 26/74 (35%)
Frame = +1
Query: 43 EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 222
E S + C+ + S S RS Q HS S E R SC D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRD 256
Query: 223 SMLSCRKHDQRCDQ 264
+K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.1
Identities = 21/74 (28%), Positives = 26/74 (35%)
Frame = +1
Query: 43 EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 222
E S + C+ + S S RS Q HS S E R SC D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRD 256
Query: 223 SMLSCRKHDQRCDQ 264
+K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.1
Identities = 21/74 (28%), Positives = 26/74 (35%)
Frame = +1
Query: 43 EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 222
E S + C+ + S S RS Q HS S E R SC D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRD 256
Query: 223 SMLSCRKHDQRCDQ 264
+K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 3.7
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -3
Query: 228 HTVLTAASSFLEPNHFSTF-NWRGLTMRMSTAKCLKFRFRTPR 103
+ V +A SF P F WR +ST K + FRT +
Sbjct: 247 YVVYSALGSFYIPMLVMLFFYWRIYNAAVSTTKAINQGFRTTK 289
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +2
Query: 245 MIKGVTKGFQYKMRAVYAH 301
M++G+ G QY Y H
Sbjct: 740 MLRGIASGMQYLAEMNYVH 758
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.8 bits (44), Expect = 4.9
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +1
Query: 229 LSCRKHDQRCDQGIPIQDACSV---RSFPYQLCHH*GKHNY 342
L C +C GI + AC + P +LC G NY
Sbjct: 37 LGCGDSCHKCKYGIAMSSACGIVQCAKGPDELCG--GPQNY 75
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 218 RTVCSHVENMIKGV 259
R VC +EN I+G+
Sbjct: 477 RAVCGRIENTIQGL 490
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,687
Number of Sequences: 438
Number of extensions: 3485
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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