Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B24
(421 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 235 8e-63
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 232 1e-61
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 218 2e-57
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 129 1e-30
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 111 2e-25
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 108 2e-24
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 107 3e-24
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 106 8e-24
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 104 3e-23
03_01_0034 + 318432-318825,318902-319851 104 3e-23
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 103 6e-23
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 101 2e-22
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 85 2e-17
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.38
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 0.87
12_02_0667 + 21682386-21682944,21683042-21683201,21683419-216834... 29 1.5
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 1.5
06_01_0111 + 870781-871017,871194-871240,871681-871947,872196-87... 29 2.0
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 29 2.0
12_02_0823 + 23461423-23462124 28 2.7
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 28 2.7
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 28 3.5
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 4.6
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 27 4.6
06_01_1088 - 8926361-8927301,8927437-8927705,8927850-8929023,892... 27 6.1
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 27 6.1
12_02_0070 - 13164738-13164809,13165187-13165501 27 8.1
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 8.1
07_01_0776 + 5983684-5983857,5983962-5984072,5984151-5984302,598... 27 8.1
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 27 8.1
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 235 bits (576), Expect = 8e-63
Identities = 100/111 (90%), Positives = 109/111 (98%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIG
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIG 111
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 232 bits (567), Expect = 1e-61
Identities = 98/111 (88%), Positives = 108/111 (97%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIG
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIG 111
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 218 bits (532), Expect = 2e-57
Identities = 91/111 (81%), Positives = 105/111 (94%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
HVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVG 111
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 129 bits (311), Expect = 1e-30
Identities = 57/74 (77%), Positives = 66/74 (89%)
Frame = +1
Query: 199 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE 378
+D T G D+FNTFFSET +GKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 379 DAANNYARGHYTIG 420
DAANN+ARGHYT+G
Sbjct: 158 DAANNFARGHYTVG 171
Score = 81.4 bits (192), Expect = 3e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 204
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 111 bits (268), Expect = 2e-25
Identities = 51/117 (43%), Positives = 72/117 (61%)
Frame = +1
Query: 70 QKTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 249
+K + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 250 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
E G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG 289
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 108 bits (260), Expect = 2e-24
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 258
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 259 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 107 bits (258), Expect = 3e-24
Identities = 49/111 (44%), Positives = 68/111 (61%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 106 bits (254), Expect = 8e-24
Identities = 48/111 (43%), Positives = 68/111 (61%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 104 bits (250), Expect = 3e-23
Identities = 46/111 (41%), Positives = 68/111 (61%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 104 bits (249), Expect = 3e-23
Identities = 47/111 (42%), Positives = 66/111 (59%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEG 109
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 103 bits (247), Expect = 6e-23
Identities = 47/111 (42%), Positives = 67/111 (60%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 101 bits (243), Expect = 2e-22
Identities = 47/111 (42%), Positives = 65/111 (58%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEG 109
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 85.4 bits (202), Expect = 2e-17
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Frame = +1
Query: 91 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 270
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 271 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHY 411
+PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYH 109
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 31.1 bits (67), Expect = 0.38
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 227 SSPPPMVLSVGI*PSGWMPCSRQYSSQ 147
S P P+ LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 29.9 bits (64), Expect = 0.87
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 224 SPPPMVLSVGI*PSGWMPCSRQYSSQ 147
+P P+ LSV + SGW+PC+R ++
Sbjct: 149 NPYPVNLSVSVGLSGWLPCARSLKNK 174
>12_02_0667 +
21682386-21682944,21683042-21683201,21683419-21683467,
21683570-21683683,21683794-21684294,21684594-21684980,
21685074-21685172,21685380-21685478,21685817-21685890,
21686387-21687023
Length = 892
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = -2
Query: 411 VVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEERVE 232
+V + VV G+ L ++ +W + + + ++ Y+G +I L S G R+E
Sbjct: 568 IVYIAFVVHGVCLYINRTWWKQTTWMYLAIPILLYAGERIFR-----ALRSHGFTTVRIE 622
Query: 231 GVVSTPDGLVSWHLT 187
V P +++ H+T
Sbjct: 623 KVAIYPGNVIAIHMT 637
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.1 bits (62), Expect = 1.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 221 PPPMVLSVGI*PSGWMPCSR 162
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>06_01_0111 +
870781-871017,871194-871240,871681-871947,872196-872848,
872997-873043,873124-873169,873371-873416,873592-873720,
873822-873942
Length = 530
Score = 28.7 bits (61), Expect = 2.0
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 131 RSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL 307
+S MP + + TA+ L R LT S V + P + + P TF PSSS +PL
Sbjct: 191 QSNMPPITTETIETANKL--RQDLTNASTVNSAPMSNT---PSQTPTFVSPSSSSTSPL 244
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 215 PMVLSVGI*PSGWMPCSRQYSSQ 147
P+ LS I SGW+PCSR S+
Sbjct: 184 PVTLSAVIGLSGWLPCSRTLKSK 206
>12_02_0823 + 23461423-23462124
Length = 233
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 122 PESRSEMPAGSCIAL--STASNLMVRCQLTRPSGVETTPSTRSSARP-ELASTFPVPS 286
P S+ + AG + TA RC LTR +G + P + P EL F PS
Sbjct: 159 PRSQRVVGAGGAVVACRGTADYFKARCPLTRTTGSDVEPVPQHCLAPGELKVVFCQPS 216
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 257 ELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQ 388
E A++ P+P+S L+P A A +C + N+S R P+
Sbjct: 2 EAAASLPLPASRFLSPPPHPTPAAAAAAACCSRRNISCARAAPR 45
>05_06_0020 + 24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 134 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSI 295
SE+P S + S A ++ PS E T + ++RP A FP P S++
Sbjct: 868 SELPQTSTTSNSEAQEETAAIRVASPSVSEVTVT---ASRPSSAPVFPAPRSTV 918
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 184 DGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 279
DG++PTD G D N S+ A + P+
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSPK 374
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 27.5 bits (58), Expect = 4.6
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = -2
Query: 417 NGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEER 238
+GVV V G+ T D + ++ V S ++ G G++++ +GLA
Sbjct: 290 SGVVRVGDKVHGLRSTDDGVQKIEDGKVVKLMKKKGTSMVIVEAAGAGDIISMAGLAAPA 349
Query: 237 VEGVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISD 133
+ VS D L + TI LD I + G++D
Sbjct: 350 IGHTVSNSDILTALP-TIELDP--PTISMTFGVND 381
>06_01_1088 -
8926361-8927301,8927437-8927705,8927850-8929023,
8929132-8929399
Length = 883
Score = 27.1 bits (57), Expect = 6.1
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 140 MPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*LTR 319
MP S + +L + C+L P G+ PS R R + S V + L LT
Sbjct: 808 MPVDSFVGFKYLQDLKIHCKLLCPQGMVLPPSLR---RLSIVSGRKVDFPACLQS--LTS 862
Query: 320 SALAHTDSC 346
+ H SC
Sbjct: 863 LNILHLSSC 871
>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 27.1 bits (57), Expect = 6.1
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +1
Query: 97 CISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 276
CI + V IG C C G DK GDD +ET HVP
Sbjct: 2740 CIEISVDGKFALIGT-CLSNSCNRDGFSAIDDYELDKP--NGDDDLPEL-NETKPSVHVP 2795
Query: 277 RAVFVDL 297
F+DL
Sbjct: 2796 SVCFIDL 2802
>12_02_0070 - 13164738-13164809,13165187-13165501
Length = 128
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = -2
Query: 324 ADLVNYSGFKIDEDGTGNVLASSGL-----AEERVEGVVSTPD 211
A L+++ G+ + GTGN ASS E VEG V+ D
Sbjct: 23 ASLLDWLGYNCERGGTGNDAASSASRWENNGEVEVEGAVALED 65
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 26.6 bits (56), Expect = 8.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 139 NACWELYCLEHGI 177
N CW+L C+EH +
Sbjct: 467 NLCWKLICMEHAV 479
>07_01_0776 +
5983684-5983857,5983962-5984072,5984151-5984302,
5984403-5984460,5984568-5984616,5984714-5984958,
5985129-5985206,5986016-5986246
Length = 365
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -2
Query: 231 GVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISDLDSGLANVYRDALTH 88
G + P+ + ++ I L + A+ +PAG + GLA RD + H
Sbjct: 215 GRAALPNATPNLNIGIDLWSTPPALAVPAGQGEASPGLALARRDGVAH 262
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 26.6 bits (56), Expect = 8.1
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 209 PSGVETTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQ 388
PS T P T S P L + P PSSS P +R+ +D ++N+S ++
Sbjct: 162 PSPSPTGPPTPSPTNPNLEPSPPPPSSS-APP---SRTPSNSSDGPTTRDNISSSKKQNS 217
Query: 389 TTMLVV 406
+T+ +V
Sbjct: 218 STLKIV 223
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,266,701
Number of Sequences: 37544
Number of extensions: 311470
Number of successful extensions: 1083
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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