Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B24
(421 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 246 8e-66
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 244 2e-65
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 244 2e-65
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 243 4e-65
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 243 4e-65
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 241 1e-64
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 241 2e-64
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 202 1e-52
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 9e-41
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 2e-40
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 8e-27
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 9e-25
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 108 2e-24
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 105 1e-23
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 104 3e-23
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 3e-16
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 80 8e-16
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 8e-16
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 77 6e-15
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 74 4e-14
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 71 4e-13
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 61 3e-10
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.096
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.096
SB_33002| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.17
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.17
SB_51769| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.22
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 1.2
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_47730| Best HMM Match : Ion_trans (HMM E-Value=1e-14) 29 2.1
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 28 3.6
SB_3316| Best HMM Match : Keratin_B2 (HMM E-Value=0.32) 27 4.8
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 27 6.3
SB_23899| Best HMM Match : TNFR_c6 (HMM E-Value=7.1e-09) 27 6.3
SB_11681| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_49595| Best HMM Match : POPLD (HMM E-Value=1.1) 27 6.3
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 27 6.3
SB_55214| Best HMM Match : DUF1665 (HMM E-Value=3) 27 8.3
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 246 bits (601), Expect = 8e-66
Identities = 108/113 (95%), Positives = 112/113 (99%)
Frame = +1
Query: 82 YKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 261
Y+ RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 262 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G
Sbjct: 492 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 544
Score = 245 bits (599), Expect = 1e-65
Identities = 107/111 (96%), Positives = 111/111 (100%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHYT+G
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVG 111
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 244 bits (598), Expect = 2e-65
Identities = 108/111 (97%), Positives = 111/111 (100%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 111
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 244 bits (597), Expect = 2e-65
Identities = 109/110 (99%), Positives = 110/110 (100%)
Frame = +1
Query: 91 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 270
RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 271 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 175
Score = 244 bits (596), Expect = 3e-65
Identities = 107/111 (96%), Positives = 111/111 (100%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 696
Score = 165 bits (401), Expect = 1e-41
Identities = 73/81 (90%), Positives = 78/81 (96%)
Frame = +1
Query: 67 VQKTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 246
V + +Y+ RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFF
Sbjct: 507 VPRVEYQ-RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFF 565
Query: 247 SETGAGKHVPRAVFVDLEPTV 309
SETGAGKHVPRAVFVDLEPTV
Sbjct: 566 SETGAGKHVPRAVFVDLEPTV 586
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 243 bits (595), Expect = 4e-65
Identities = 107/110 (97%), Positives = 110/110 (100%)
Frame = +1
Query: 91 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 270
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 271 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 110
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 243 bits (595), Expect = 4e-65
Identities = 107/113 (94%), Positives = 111/113 (98%)
Frame = +1
Query: 82 YKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 261
Y+ RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 262 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
GKHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G
Sbjct: 863 GKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 915
Score = 240 bits (588), Expect = 3e-64
Identities = 104/110 (94%), Positives = 110/110 (100%)
Frame = +1
Query: 91 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 270
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 271 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 482
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 241 bits (591), Expect = 1e-64
Identities = 103/113 (91%), Positives = 112/113 (99%)
Frame = +1
Query: 82 YKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 261
Y+ REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 262 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
GKHVPRAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHYT+G
Sbjct: 477 GKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 529
Score = 211 bits (515), Expect = 2e-55
Identities = 92/96 (95%), Positives = 95/96 (98%)
Frame = +1
Query: 133 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 312
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF DLEPTVV
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 313 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 96
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 241 bits (590), Expect = 2e-64
Identities = 106/111 (95%), Positives = 110/111 (99%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 111
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 202 bits (492), Expect = 1e-52
Identities = 95/111 (85%), Positives = 97/111 (87%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
HVPRAVFVDLEPTVV PEQLITGKEDAANNYARGHYTIG
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIG 101
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 162 bits (394), Expect = 9e-41
Identities = 71/79 (89%), Positives = 75/79 (94%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 268 HVPRAVFVDLEPTVVDEVR 324
HVPRAVFVDLEP+VV ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 161 bits (391), Expect = 2e-40
Identities = 69/76 (90%), Positives = 76/76 (100%)
Frame = +1
Query: 193 MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 372
MP+DKTIGGGDDSFNTFF+ETGAGKHVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++G
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 373 KEDAANNYARGHYTIG 420
KEDAANNYARGHYT+G
Sbjct: 61 KEDAANNYARGHYTVG 76
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 8e-27
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 268 H 270
H
Sbjct: 256 H 256
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 109 bits (262), Expect = 9e-25
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = +1
Query: 247 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
SE AGK+VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIG
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIG 1022
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 108 bits (260), Expect = 2e-24
Identities = 51/116 (43%), Positives = 69/116 (59%)
Frame = +1
Query: 73 KTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 252
K +KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNE 266
Query: 253 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 267 ATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 322
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 105 bits (253), Expect = 1e-23
Identities = 48/111 (43%), Positives = 68/111 (61%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 59 YVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 104 bits (249), Expect = 3e-23
Identities = 48/111 (43%), Positives = 66/111 (59%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 82.6 bits (195), Expect = 1e-16
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +1
Query: 307 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 48
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 81.4 bits (192), Expect = 3e-16
Identities = 38/93 (40%), Positives = 53/93 (56%)
Frame = +1
Query: 88 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 267
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 268 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 366
+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 79.8 bits (188), Expect = 8e-16
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +1
Query: 316 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 36
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 79.8 bits (188), Expect = 8e-16
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +1
Query: 316 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 36
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 77.0 bits (181), Expect = 6e-15
Identities = 31/35 (88%), Positives = 35/35 (100%)
Frame = +1
Query: 316 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+G
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVG 36
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 74.1 bits (174), Expect = 4e-14
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +1
Query: 316 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+G
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVG 36
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 70.9 bits (166), Expect = 4e-13
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = +1
Query: 262 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 54
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 61.3 bits (142), Expect = 3e-10
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +1
Query: 262 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 420
G++VPR++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEG 65
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.1 bits (72), Expect = 0.096
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 277 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 396
RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 33.1 bits (72), Expect = 0.096
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +2
Query: 95 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF 274
SAS A + + + + S + ++ A + QL + ETTP+T +SA A+T
Sbjct: 196 SASSVIQASSSTSAVVASSSAVIMTNAPKITTTEQLATTTAAETTPTTTTSASTTTATTT 255
Query: 275 PVPSSSI 295
++S+
Sbjct: 256 KATTTSV 262
>SB_33002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 32.3 bits (70), Expect = 0.17
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = -2
Query: 408 VTTSIVVCGILLTSDKLFWMKQLSVCASADLV 313
++T IVV IL SDKL +++L+V +SA+L+
Sbjct: 1 MSTGIVVSSILFASDKLLRVEKLAVSSSANLI 32
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 32.3 bits (70), Expect = 0.17
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 212 SGVETTPSTRSSARPELASTFPVPSSS-ILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQ 388
S VETTPST S +P + FPV +SS ++P+ T + ++ +S + P+
Sbjct: 871 SSVETTPST-VSTKPR--TIFPVAASSRTISPVETTPETIPPVET--KSTTISAIESSPR 925
Query: 389 TTMLVVTTP 415
T V TTP
Sbjct: 926 TASTVETTP 934
>SB_51769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 31.9 bits (69), Expect = 0.22
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = -2
Query: 408 VTTSIVVCGILLTSDKLFWMKQLSVC 331
++TS++V IL SD+LF M++L++C
Sbjct: 1 MSTSVIVGSILFASDELFRMEELAIC 26
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 29.5 bits (63), Expect = 1.2
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +1
Query: 91 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 264
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 265 KHVP-RAVFVDLEP 303
KH P R V L P
Sbjct: 296 KHAPVRTFSVTLRP 309
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 148 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 252
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_47730| Best HMM Match : Ion_trans (HMM E-Value=1e-14)
Length = 904
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 125 ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSI 295
E S+ +C S A+N + L+ P+ + T+ +RSS+ + P+P+SSI
Sbjct: 605 EGGSQQWPHTCTPTSDATNGLP-ASLSLPTVIHTSARSRSSSSSSASLLTPIPTSSI 660
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 169 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 285
+GI+PDGQ D+ +NT F G P A+
Sbjct: 708 NGIRPDGQGLVDEGFKTASGIYNTCFERLGMNFQTPEAI 746
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 274 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTI 417
P V+ L T VD+V+TG PEQL+ K++A+ RG + +
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGFQL 169
>SB_3316| Best HMM Match : Keratin_B2 (HMM E-Value=0.32)
Length = 355
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 98 ASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARP 256
A+LYT+ RS + I S+ + +V + RPS ++T T + RP
Sbjct: 245 ATLYTIRPSSHRSTLVTSCTIRPSSHRSTLVTSCIIRPSSHKSTLVTLCTIRP 297
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 27.1 bits (57), Expect = 6.3
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -1
Query: 403 HEHSCLRHP---PYQ**VVLDETTVCMCQCGP 317
H H C R P PY V++ VCMCQ P
Sbjct: 5594 HCHPCQRSPCTVPYSRCVLIRGQAVCMCQSCP 5625
>SB_23899| Best HMM Match : TNFR_c6 (HMM E-Value=7.1e-09)
Length = 533
Score = 27.1 bits (57), Expect = 6.3
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +2
Query: 230 PSTRSSARPELAST--FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 400
P+TR S E S+ P P+SS+ L +TRS H S +S TT L
Sbjct: 234 PTTRRSTSTESTSSQSTPSPASSVTQLLDVTRSKTGHDTSSVTTLPVSQTPTSDPTTQL 292
>SB_11681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 27.1 bits (57), Expect = 6.3
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = -2
Query: 285 DGTGNVLASSGLAEERVEGVV--STPDGLVSWHLTIRLDAVLKAIQLPAGISDLD--SGL 118
DG G + + GLAEE+ +G+ + DG+ + D + K + GI+DL G+
Sbjct: 278 DGDGVTVQADGLAEEKADGIADGTKADGMAD---ETKADGMAKETKAD-GIADLTKADGI 333
Query: 117 ANV 109
A+V
Sbjct: 334 ADV 336
>SB_49595| Best HMM Match : POPLD (HMM E-Value=1.1)
Length = 1141
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 149 GSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPE 259
GS +AL+ ++ RCQ P G + +SA P+
Sbjct: 956 GSLMALAAGASADARCQREEPRGSTSAQPAGTSAEPD 992
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 149 GSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPE 259
GS +AL+ ++ RCQ P G + +SA P+
Sbjct: 1142 GSLMALAAGASADARCQREEPRGSTSAQPAGTSAEPD 1178
>SB_55214| Best HMM Match : DUF1665 (HMM E-Value=3)
Length = 452
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 98 ASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTR 241
+S Y ES+ E S + TA + RC+L R +G+E P +
Sbjct: 41 SSHYRTLPSESQRERALDSSESALTAGSEDSRCRLDRLTGMEVNPEVK 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,849,307
Number of Sequences: 59808
Number of extensions: 326941
Number of successful extensions: 1071
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 789494848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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