Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_B22
         (93 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   3.4  
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    19   3.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    19   6.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    19   6.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    18   7.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    18   7.9  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    18   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 71  YTSLPEIVSYYPISGKL 21
           YT  P +++YY I  ++
Sbjct: 897 YTKQPGMLAYYEICNRI 913


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
          (isoform B) protein.
          Length = 96

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 75 SVYLSPRDSILLSDLGEAFLFF 10
          ++ +SP +S+  +D+G+  L F
Sbjct: 23 ALVMSPANSLASTDIGDVDLEF 44


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 71  YTSLPEIVSYYPISGK 24
           + + PEI++Y   +GK
Sbjct: 386 WNATPEIITYLEKNGK 401


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 14  NKKASPRSDNKILSL 58
           N   SP+ D K LSL
Sbjct: 95  NCPPSPKDDEKCLSL 109


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 88  SHTSVCIPLSQR*YLIIRSRGS 23
           ++TS+CI + Q     +R R S
Sbjct: 222 TYTSICIEIWQSSESSLRPRSS 243


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 14  NKKASPRSDNK 46
           NK+  P+ DN+
Sbjct: 834 NKRLEPKGDNR 844


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -1

Query: 45  LLSDLGEAF 19
           LLSDL EAF
Sbjct: 156 LLSDLKEAF 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,095
Number of Sequences: 336
Number of extensions: 183
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 12
effective length of database: 118,553
effective search space used:  2133954
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)