Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_B20
         (297 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4P7Q7 Cluster: Putative uncharacterized protein; n=1; ...    33   1.7  
UniRef50_A7ANG0 Cluster: Putative uncharacterized protein; n=1; ...    32   2.2  
UniRef50_Q1VX61 Cluster: TrkA domain protein; n=1; Psychroflexus...    31   3.9  
UniRef50_Q4Y938 Cluster: DNA polymerase 1, putative; n=3; Plasmo...    31   5.1  
UniRef50_Q23A06 Cluster: MIR domain protein; n=1; Tetrahymena th...    31   5.1  
UniRef50_Q54NK4 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_Q7RM59 Cluster: Unnamed protein product; n=2; Plasmodiu...    30   8.9  

>UniRef50_Q4P7Q7 Cluster: Putative uncharacterized protein; n=1;
            Ustilago maydis|Rep: Putative uncharacterized protein -
            Ustilago maydis (Smut fungus)
          Length = 1049

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 12/43 (27%), Positives = 29/43 (67%)
 Frame = -1

Query: 258  MDLEIHYFEQISNLCHGQQHSMQSTLRRIFPDKLCVYKVILLV 130
            ++L++  FE++ +L   ++ S+++  R+++ D+L V K + LV
Sbjct: 954  LELKMSQFEELESLLEAERRSVEAGRRQLYADRLAVQKQLALV 996


>UniRef50_A7ANG0 Cluster: Putative uncharacterized protein; n=1;
            Babesia bovis|Rep: Putative uncharacterized protein -
            Babesia bovis
          Length = 1828

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -3

Query: 145  SNTFSLLIN*LYKASIQNYLNIMYCIKSIWDTRSSVIT 32
            +  F  L    YKA  + Y++I  C  ++W+  +SV+T
Sbjct: 1244 AKNFKSLAEGCYKALFEGYVHIFICHNNLWENHNSVVT 1281


>UniRef50_Q1VX61 Cluster: TrkA domain protein; n=1; Psychroflexus
           torquis ATCC 700755|Rep: TrkA domain protein -
           Psychroflexus torquis ATCC 700755
          Length = 598

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 138 VLLYTRIVYLGIFSVTCFALSAAGRDINSKFAQNN 242
           VLL   +VY+ IF +     S   +D+ SKF  NN
Sbjct: 184 VLLVVGVVYMSIFGIRLLPKSRRSKDLKSKFNVNN 218


>UniRef50_Q4Y938 Cluster: DNA polymerase 1, putative; n=3;
           Plasmodium chabaudi|Rep: DNA polymerase 1, putative -
           Plasmodium chabaudi
          Length = 1069

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
 Frame = +3

Query: 39  TLLRVSQMDLIQYIIFR*FCILALYN*LINKLKVLLYTRIVYLGIFSVTCFALSAAGRD- 215
           ++  +++ D++ Y I R   ++ L+N LIN LK  +    +Y+ +     F +S   ++ 
Sbjct: 392 SIYEITEEDMMSYCISRNIFLIILFNYLINLLKNNMNILTLYIKVEQPLIFCISEIEKEG 451

Query: 216 --INSKFAQ--NNESQGPL 260
             +N K  Q   N S  PL
Sbjct: 452 IYLNQKKIQEIQNNSNDPL 470


>UniRef50_Q23A06 Cluster: MIR domain protein; n=1; Tetrahymena
            thermophila SB210|Rep: MIR domain protein - Tetrahymena
            thermophila SB210
          Length = 3377

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
 Frame = -1

Query: 294  PTHTIRRYMSSVMDLEIHYFEQ----ISNLCHGQQHSMQSTLRRIFPDKL 157
            PT+ +        +  I+YFE+     SNLC+G+ +S+++ L + F DK+
Sbjct: 993  PTYLLLEKTPKQTEQLINYFEKQLILFSNLCYGRNYSIKNFLIKYFYDKI 1042


>UniRef50_Q54NK4 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1177

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -3

Query: 100  IQNYLNIMYCIKSIWDTRSSVITH 29
            ++NY+N    +K+ WDT SS +TH
Sbjct: 1148 LENYINWQSSVKAQWDTYSSFMTH 1171


>UniRef50_Q7RM59 Cluster: Unnamed protein product; n=2; Plasmodium
           (Vinckeia)|Rep: Unnamed protein product - Plasmodium
           yoelii yoelii
          Length = 1103

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
 Frame = +3

Query: 51  VSQMDLIQYIIFR*FCILALYN*LINKLK-----VLLYTRIVYLGIFSVTCFALSAAGRD 215
           +++ D+I + + R   ++ L+N LIN+LK     + LYT+I    IF ++   +   G  
Sbjct: 519 ITEEDMIFFCVSRNIFLIILFNYLINQLKYNINILTLYTKIEQPLIFCIS--EIEKEGIY 576

Query: 216 INSKFAQ--NNESQGPL 260
           +N K  Q   N S  PL
Sbjct: 577 LNQKKIQEIQNNSNNPL 593


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,175,938
Number of Sequences: 1657284
Number of extensions: 4690846
Number of successful extensions: 8868
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8867
length of database: 575,637,011
effective HSP length: 75
effective length of database: 451,340,711
effective search space used: 10380836353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)