Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_B20
         (297 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   0.40 
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    23   0.92 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   3.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   3.7  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    20   6.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   6.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   8.5  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 0.40
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 106 ASIQNYLNIMYCIKSIWDTRSSVIT 32
           A IQNY  ++   + +WD    ++T
Sbjct: 156 ADIQNYATLIKEFREVWDQHGLLLT 180


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 0.92
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 291 THTIRRYMSSVMDLEIHYFEQISNLCHGQQHSMQSTLRRI 172
           T +IR  +++   + + Y      LCH +  S   T+R I
Sbjct: 156 TRSIRLTITASCPMNLQYLPMDRQLCHIEIESFGYTMRDI 195


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +1

Query: 61  WI*YNTLYLGNFVYWLYXXXXXXN*KYY 144
           W+  N  +L  F+YW+       N  Y+
Sbjct: 428 WLKNNPEFLDAFLYWVDEILANHNDVYF 455


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -3

Query: 112 YKASIQNYLNIMYCIKSIWDTRSSV 38
           ++   +NY NI+Y  + ++   S+V
Sbjct: 324 FEIGFENYYNILYFSRIMFHINSAV 348


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 244 NLKVHYGTHVPAYSVCGV 297
           +L  H+ T +PA S C V
Sbjct: 429 DLNQHFETGLPAGSYCDV 446


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 5/17 (29%), Positives = 10/17 (58%)
 Frame = +1

Query: 55  PKWI*YNTLYLGNFVYW 105
           P W+ +   +L N ++W
Sbjct: 241 PNWLFFLANFLTNLLFW 257


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 8.5
 Identities = 6/24 (25%), Positives = 12/24 (50%)
 Frame = -1

Query: 234  EQISNLCHGQQHSMQSTLRRIFPD 163
            +   N C   +H + +T+R +  D
Sbjct: 1743 DDFKNRCGEGRHPLLTTIRNVLAD 1766


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,725
Number of Sequences: 336
Number of extensions: 1414
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5322850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)