Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_B19
(362 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 31 0.25
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 31 0.25
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 31 0.33
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 31 0.33
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 31 0.33
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 31 0.33
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 31 0.33
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 31 0.33
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 31 0.33
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 31 0.33
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 0.75
U39651-7|AAA80398.2| 494|Caenorhabditis elegans Hypothetical pr... 28 1.7
U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z29116-4|CAA82370.2| 206|Caenorhabditis elegans Hypothetical pr... 27 3.0
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 27 3.0
U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of s... 27 3.0
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 26 7.0
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 26 7.0
Z95619-3|CAB54269.1| 490|Caenorhabditis elegans Hypothetical pr... 26 9.3
Z95619-2|CAB09114.1| 450|Caenorhabditis elegans Hypothetical pr... 26 9.3
Z68318-7|CAA92696.2| 385|Caenorhabditis elegans Hypothetical pr... 26 9.3
AF016677-6|AAB66145.3| 340|Caenorhabditis elegans Hypothetical ... 26 9.3
AC006832-1|AAO38581.1| 376|Caenorhabditis elegans Hypothetical ... 26 9.3
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.1 bits (67), Expect = 0.25
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 92 YTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 196
+T G NC CA +S + T C CKPG Y
Sbjct: 711 FTFGKNCRFPCKCARENSEGCDEITGKCRCKPGYY 745
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.1 bits (67), Expect = 0.25
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 92 YTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 196
+T G NC CA +S + T C CKPG Y
Sbjct: 711 FTFGKNCRFPCKCARENSEGCDEITGKCRCKPGYY 745
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 30.7 bits (66), Expect = 0.33
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 68 DVKCRSDEYTPGPNCGLEPTCA-PRSSHSYPKHTCDCWCKPGTYRVIDTNDCVTLEHCH 241
D +C+ +E EPTC P + + C C G +R N CV + C+
Sbjct: 23 DQECKENESFQTCGTACEPTCGLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCN 81
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 30.7 bits (66), Expect = 0.33
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 68 DVKCRSDEYTPGPNCGLEPTCA-PRSSHSYPKHTCDCWCKPGTYRVIDTNDCVTLEHCH 241
D +C+ +E EPTC P + + C C G +R N CV + C+
Sbjct: 23 DQECKENESFQTCGTACEPTCGLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCN 81
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 30.7 bits (66), Expect = 0.33
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 68 DVKCRSDEYTPGPNCGLEPTCA-PRSSHSYPKHTCDCWCKPGTYRVIDTNDCVTLEHCH 241
D +C+ +E EPTC P + + C C G +R N CV + C+
Sbjct: 23 DQECKENESFQTCGTACEPTCGLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCN 81
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 30.7 bits (66), Expect = 0.33
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 68 DVKCRSDEYTPGPNCGLEPTCA-PRSSHSYPKHTCDCWCKPGTYRVIDTNDCVTLEHCH 241
D +C+ +E EPTC P + + C C G +R N CV + C+
Sbjct: 23 DQECKENESFQTCGTACEPTCGLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCN 81
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 30.7 bits (66), Expect = 0.33
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 68 DVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPG 190
++ C D Y GPNC + C + T C CKPG
Sbjct: 413 ELACSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPG 451
Score = 29.9 bits (64), Expect = 0.57
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 74 KCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 196
KC +++Y G +C TC ++ +T C CKPG Y
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFY 408
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 30.7 bits (66), Expect = 0.33
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 68 DVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPG 190
++ C D Y GPNC + C + T C CKPG
Sbjct: 413 ELACSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPG 451
Score = 29.9 bits (64), Expect = 0.57
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 74 KCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 196
KC +++Y G +C TC ++ +T C CKPG Y
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFY 408
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 30.7 bits (66), Expect = 0.33
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 68 DVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPG 190
++ C D Y GPNC + C + T C CKPG
Sbjct: 413 ELACSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPG 451
Score = 29.9 bits (64), Expect = 0.57
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 74 KCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 196
KC +++Y G +C TC ++ +T C CKPG Y
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFY 408
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 30.7 bits (66), Expect = 0.33
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 68 DVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPG 190
++ C D Y GPNC + C + T C CKPG
Sbjct: 413 ELACSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPG 451
Score = 29.9 bits (64), Expect = 0.57
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 74 KCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 196
KC +++Y G +C TC ++ +T C CKPG Y
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFY 408
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 29.5 bits (63), Expect = 0.75
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +2
Query: 92 YTPGPNCGLEPTCAPRSSHSYPKH---TCDCWCKPGT 193
Y P NC LEP ++ H +C CKPG+
Sbjct: 1151 YAPATNCNLEPRICHANAQCVMHHDTNAYECICKPGS 1187
>U39651-7|AAA80398.2| 494|Caenorhabditis elegans Hypothetical
protein ZK470.1 protein.
Length = 494
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 360 KFIFAFYLILKRQI----INQLTTVK*LRITSITSNNYSCLVG*WQCSNVTQS 214
+F+ F+L+L R+I I ++TT+ ITS N W S +QS
Sbjct: 157 RFLIKFFLLLYRKIGRKKIGKITTMNFTNITSFDGNETEVFDTSWSLSTPSQS 209
>U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical
protein F57F4.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 188 GTYRVIDTNDCVTLEHCH*PTRQL*LLLVIDVIRNYLTVVN*LIICLFK 334
G +RVI T + H H R L +L ++ +Y+ ++ ++I +F+
Sbjct: 223 GPHRVIATKNEFLKSHIHSKLRNLMCMLHFFIVMHYIKILKFVLIAIFQ 271
>Z29116-4|CAA82370.2| 206|Caenorhabditis elegans Hypothetical
protein ZK507.4 protein.
Length = 206
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +2
Query: 104 PNCGLE--PTCAPRSSHSYPKHTCDCWCKP 187
PNC + P C + Y H WCKP
Sbjct: 132 PNCNVSVHPHCTRQCKCEYEYHRMQKWCKP 161
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 27.5 bits (58), Expect = 3.0
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +2
Query: 74 KCRSDEYTPGPNCGLEPTCAPRSSH-SYPKHTCDCWCKPGTYRVIDTNDCVTLEHC 238
+C DE EPTC + T C CK G R T CV C
Sbjct: 76 ECEGDEELKACGSACEPTCDNENPECDLVCMTNVCQCKKGLVRDSATGKCVEKNKC 131
>U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform a
protein.
Length = 135
Score = 27.5 bits (58), Expect = 3.0
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +2
Query: 29 VIVLLCLIIFVKADVKCRSDEYTPGPNCGLEPTC--APRS-SHSYPKHTCDCWCKPGTYR 199
++++ C++ A C ++E + EP C P++ + +TCD CK G R
Sbjct: 4 LVIITCIVAVATATKTCEANEELVSCHNTCEPQCGYTPKACTEQCIMNTCD--CKDGFVR 61
Query: 200 VIDTNDCVTLEHC 238
CV + C
Sbjct: 62 -NSLGKCVEVSEC 73
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 164 TCDCWCKPGTYRVIDTNDCVTLE 232
T C CK GT+R + ++ C+ +E
Sbjct: 249 TWRCVCKLGTFRPLGSDKCIPIE 271
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 164 TCDCWCKPGTYRVIDTNDCVTLE 232
T C CK GT+R + ++ C+ +E
Sbjct: 249 TWRCVCKLGTFRPLGSDKCIPIE 271
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 164 TCDCWCKPGTYRVIDTNDCVTLE 232
T C CK GT+R + ++ C+ +E
Sbjct: 249 TWRCVCKLGTFRPLGSDKCIPIE 271
>Z95619-3|CAB54269.1| 490|Caenorhabditis elegans Hypothetical
protein H21P03.3b protein.
Length = 490
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 23 WSVIVLLCLIIFVKADVKCRSDEYTPGPNCGLEPTCAPR 139
W V+ LC I + ++C + TP P + C+PR
Sbjct: 256 WIVLRRLCFIGSILYGMRCITMMVTPVPKADEDFECSPR 294
>Z95619-2|CAB09114.1| 450|Caenorhabditis elegans Hypothetical
protein H21P03.3a protein.
Length = 450
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 23 WSVIVLLCLIIFVKADVKCRSDEYTPGPNCGLEPTCAPR 139
W V+ LC I + ++C + TP P + C+PR
Sbjct: 216 WIVLRRLCFIGSILYGMRCITMMVTPVPKADEDFECSPR 254
>Z68318-7|CAA92696.2| 385|Caenorhabditis elegans Hypothetical
protein T21B10.6 protein.
Length = 385
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 32 IVLLCLIIFVKADVKCRSDEYTPGPNCGLEPTCAPRSSHSYPK 160
++LL L+ F +KC+ +E TP EPT + + Y K
Sbjct: 7 MLLLLLLCFDGPGIKCQDEEPTPRNEVLGEPTVSCAADAIYVK 49
>AF016677-6|AAB66145.3| 340|Caenorhabditis elegans Hypothetical
protein ZK1240.2 protein.
Length = 340
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 59 VKADVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCD 172
+ A KC S +Y +EPTC RSS TC+
Sbjct: 85 IDAPPKCASHQYNLAEFVCIEPTC--RSSDKLMCRTCE 120
>AC006832-1|AAO38581.1| 376|Caenorhabditis elegans Hypothetical
protein ZK355.2b protein.
Length = 376
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 88 ITSAFHVSFHENNETQQDYNAPDLHCASC 2
+ S F VS NET D+N+ D+ CA+C
Sbjct: 28 LESIFSVSPAYENETA-DHNSTDVLCANC 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,683,604
Number of Sequences: 27780
Number of extensions: 151328
Number of successful extensions: 440
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -