Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_B17
         (410 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    24   2.5  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    23   4.3  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            22   7.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    22   7.6  

>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 235 CRTCMPLTKLLLYRRT 282
           CR   P++K+LL+R+T
Sbjct: 296 CRVHRPMSKVLLFRKT 311


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 19  LNSSDRFDICVTESQWEPRQALQTRGR 99
           LNSSDR D  V  ++W   ++   + R
Sbjct: 275 LNSSDRADRTVRPARWTDERSRPRKAR 301


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = -3

Query: 153 FPTLRRN*S-LLKMFSPEDSAPRLQCLPW 70
           +P +R   +  LK + PED + R    PW
Sbjct: 586 YPAIREKLARALKGWHPEDRSARAMLTPW 614


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 160 PAFPDTTSELELVENVLAR 104
           P FPD   E +L  N L R
Sbjct: 305 PEFPDKRREYKLARNALKR 323


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,103
Number of Sequences: 2352
Number of extensions: 7363
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)